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ar4r2_scaffold_6860_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

partial RP 40 / 55 MC: 1 BSCG 40 / 51 MC: 1 ASCG 13 / 38 MC: 2
Location: comp(2..646)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 213.0
  • Bit_score: 256
  • Evalue 7.80e-66
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 56.8
  • Coverage: 213.0
  • Bit_score: 256
  • Evalue 3.90e-65
tRNA pseudouridine synthase A n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZX4_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 213.0
  • Bit_score: 256
  • Evalue 2.80e-65

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Taxonomy

Halothiobacillus neapolitanus → Halothiobacillus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCAGACCCGTGTAGCCATGGGGATTGAATATTTGGGGGCGCGCTATCATGGCTGGCAGATTCAGCCGAGCGTGGATAGTGTGCAGGCTCGTTTGCAGGAGGCGTTGAGTCGCATTGCCAATCACCCGGTGGAGATTGTCTGTGCGGGGCGCACGGATCGCGGCGTTCACGCCACGATGCAGGTCATCCATTTCGACACGACGGCGCAGCGCAGCCTGCAAGCCTGGCAACGCGGCGCCTTGAGCGGTTTGCCCGATGATATCGGCGTGCTTTGGGTGCGTGAGATGAAGGCCGATTTTCACGCGCGTTTCAGCGCGTTACGCCGCAGTTATCGTTACGTGTTGTATAACGCCGCGCATCGCCCAGGGCTGTTGCATGGGCGGGTGAGCTGGTTTCACCTGCCTTTGGAAGTGGAGCGTATGCAGCAGGCGGCGCTGCATCTTTTGGGTGAGCATGATTTTTCCAGCTTTCGCGGCAGGGATTGTCAGGCGCATTCACCCGTGCGCACGCTGTCCGATTTCAAGATTCAGCGTGACGGTGAGTTCATTTATTTCGATCTGAGCGCCAACGCGTTTCTGATGCACATGGTGCGCAATATGGTCGGAACCTTGCTGCAGGTGGGCACGGGCAAGCGGGAAGCAACC
PROTEIN sequence
Length: 215
MQTRVAMGIEYLGARYHGWQIQPSVDSVQARLQEALSRIANHPVEIVCAGRTDRGVHATMQVIHFDTTAQRSLQAWQRGALSGLPDDIGVLWVREMKADFHARFSALRRSYRYVLYNAAHRPGLLHGRVSWFHLPLEVERMQQAALHLLGEHDFSSFRGRDCQAHSPVRTLSDFKIQRDGEFIYFDLSANAFLMHMVRNMVGTLLQVGTGKREAT