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ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial

ALUMROCK_MS4_Gammaproteobacteria_57_15
In projects: ALUMROCK_MS4  |  alumrock-genomes

Consensus taxonomy: Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Description

Final.

Displaying items 201-250 of 387 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
ar4r2_scaffold_9745
Class: Gammaproteobacteria (50%)
4 4125 bp 58.08 19.64 96.22
ar4r2_scaffold_6569
Order: Chromatiales (50%)
6 4121 bp 54.33 14.49 94.20
ar4r2_scaffold_6582
Species: Sulfuricella sp. T08 (66.67%)
3 4113 bp 59.81 21.19 91.61
ar4r2_scaffold_6612
Genus: Acidithiobacillus (60%)
5 4098 bp 59.49 10.61 88.58
ar4r2_scaffold_6685
Class: Gammaproteobacteria (50%)
4 4062 bp 62.16 17.73 85.75
ar4r2_scaffold_6717
Class: Gammaproteobacteria (50%)
4 4048 bp 58.47 16.93 95.31
ar4r2_scaffold_6840
Species: Halothiobacillus neapolitanus (60%)
5 3984 bp 53.46 13.14 99.85
ar4r2_scaffold_6874
Phylum: Proteobacteria (50%)
4 3961 bp 52.56 15.03 88.46
ar4r2_scaffold_6896
Phylum: Proteobacteria (66.67%)
3 3950 bp 55.06 11.24 96.99
ar4r2_scaffold_6935
Species: BJP_IG2102_Gammaproteobacteria_62_140 (50%)
4 3924 bp 59.68 14.68 93.50
ar4r2_scaffold_6976
Phylum: Proteobacteria (71.43%)
7 3908 bp 57.83 10.75 98.34
ar4r2_scaffold_6988 5 3903 bp 57.78 16.79 79.71
ar4r2_scaffold_7018
Phylum: Proteobacteria (80%)
5 3886 bp 67.09 13.47 100.44
ar4r2_scaffold_7041
Order: Chromatiales (60%)
5 3875 bp 56.08 13.24 97.63
ar4r2_scaffold_7052
Order: Chromatiales (66.67%)
3 3868 bp 57.52 13.69 90.43
ar4r2_scaffold_7057
Class: Gammaproteobacteria (50%)
4 3866 bp 59.00 15.29 94.13
ar4r2_scaffold_7089
Species: Acidithiobacillus ferrivorans (75%)
4 3850 bp 63.19 10.68 95.53
ar4r2_scaffold_7092
Species: CG_Hydro_01 (50%)
4 3848 bp 58.21 14.46 98.47
ar4r2_scaffold_7112
Order: Chromatiales (66.67%)
3 3839 bp 56.21 11.88 96.51
ar4r2_scaffold_7113
Class: Gammaproteobacteria (60%)
5 3839 bp 56.29 13.60 90.49
ar4r2_scaffold_7150
Order: Chromatiales (50%)
4 3816 bp 58.70 11.91 99.69
ar4r2_scaffold_7153
Class: Gammaproteobacteria (80%)
5 3814 bp 58.44 13.14 86.21
ar4r2_scaffold_7158
Class: Gammaproteobacteria (100%)
3 3812 bp 56.87 10.62 98.06
ar4r2_scaffold_7189
Phylum: Proteobacteria (66.67%)
6 3796 bp 54.77 14.27 79.82
ar4r2_scaffold_7190
Class: Gammaproteobacteria (80%)
5 3796 bp 53.37 13.24 92.86
ar4r2_scaffold_7281
Species: Halothiobacillus neapolitanus (50%)
4 3751 bp 59.16 13.56 86.14
ar4r2_scaffold_7286
Class: Gammaproteobacteria (50%)
4 3748 bp 51.39 12.33 92.21
ar4r2_scaffold_7302
Order: Chromatiales (66.67%)
6 3740 bp 57.30 12.87 90.24
ar4r2_scaffold_7346
Class: Gammaproteobacteria (60%)
5 3717 bp 61.72 8.84 90.72
ar4r2_scaffold_7380
Class: Gammaproteobacteria (80%)
5 3695 bp 59.16 13.03 99.13
ar4r2_scaffold_7406
Class: Gammaproteobacteria (66.67%)
3 3681 bp 57.76 12.31 90.87
ar4r2_scaffold_7413
Species: Halothiobacillus neapolitanus (66.67%)
3 3678 bp 58.43 17.99 90.46
ar4r2_scaffold_7439
Class: Gammaproteobacteria (75%)
4 3667 bp 58.47 13.01 97.19
ar4r2_scaffold_7445 4 3663 bp 60.55 13.06 77.72
ar4r2_scaffold_7460
Class: Gammaproteobacteria (83.33%)
6 3657 bp 57.92 15.30 93.36
ar4r2_scaffold_7535
Class: Gammaproteobacteria (100%)
3 3623 bp 59.04 11.80 97.38
ar4r2_scaffold_7553
Species: Halothiobacillus neapolitanus (50%)
4 3609 bp 56.64 13.18 95.76
ar4r2_scaffold_7646
Class: Gammaproteobacteria (60%)
5 3575 bp 58.10 10.57 89.87
ar4r2_scaffold_7665
Species: Halothiobacillus neapolitanus (50%)
4 3563 bp 54.62 20.25 92.79
ar4r2_scaffold_7705
Order: Chromatiales (75%)
4 3547 bp 58.64 11.76 91.26
ar4r2_scaffold_7750
Species: Acidithiobacillus ferrivorans (100%)
3 3531 bp 59.08 8.96 99.15
ar4r2_scaffold_7805
Class: Gammaproteobacteria (66.67%)
3 3505 bp 56.58 11.08 94.92
ar4r2_scaffold_7848
Phylum: Proteobacteria (50%)
4 3491 bp 48.70 11.90 92.47
ar4r2_scaffold_7850
Phylum: Proteobacteria (80%)
5 3491 bp 56.37 17.14 81.38
ar4r2_scaffold_7905
Class: Gammaproteobacteria (80%)
5 3468 bp 56.29 14.88 89.04
ar4r2_scaffold_7946
Class: Gammaproteobacteria (50%)
4 3448 bp 59.37 15.23 95.62
ar4r2_scaffold_7983
Order: Chromatiales (60%)
5 3434 bp 57.54 11.09 99.68
ar4r2_scaffold_7999
Species: Methylobacillus flagellatus (75%)
4 3429 bp 61.01 8.66 93.35
ar4r2_scaffold_10154
Species: Halothiobacillus neapolitanus (60%)
5 3429 bp 55.61 11.37 96.94
ar4r2_scaffold_8002
Species: Beggiatoa sp. PS (66.67%)
3 3428 bp 65.40 18.82 92.33
Displaying items 201-250 of 387 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.