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ar4r2_scaffold_1716_17

Organism: ALUMROCK_MS4_Beggiotoa_37_524_curated

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(18801..20972)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 717.0
  • Bit_score: 998
  • Evalue 2.70e-288
Ribonuclease R n=1 Tax=Beggiatoa alba B18LD RepID=I3CI99_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 66.8
  • Coverage: 732.0
  • Bit_score: 988
  • Evalue 3.40e-285
  • rbh
ribonuclease R similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 727.0
  • Bit_score: 994
  • Evalue 1.30e-287

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Taxonomy

Candidatus Thiomargarita nelsonii → Thiomargarita → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2172
ATGAGCCGCCGTAAATCCCCATCCAAAAGTGATCCATTTGCAGAACGCGAAGCTGAAAAATATGCTAAACCGATTCCAAGTCGTGAATTTATCATGGAACACTTGGCTTGTGTTGGTAAACCATTAAATTTAAATATGATCGCAGAGATTTTTCACCTCTCTCATGAAGACGATTTGGAAGCATTACGTCGTCGTCTTCGAGCAATGGAGAGAGATGGTCAAGTGATTCGTAATCGTCGTAAAGAATATGGACTGGCGAAGAAAATGGATTTGGTACGCGGTCGTGTCATTGCCCATCCTGATGGTTTTGGTTTTTTAGTACCAGATGAAGGAGGAAACGATCTATTTCTGTCAGAAAAACAAATGCGCAGTTTATTACATGGAGATCGGGCTTTAGCTAATATTGTAGGTATCGATCATCGAGGTCGACGTGAAGGTGCATTAGTGGAAGTCTTAGAACGTAACACTTCTGAAGTAGTCGGACGCTTTTTTCATAAAAAAGGCATTGGTTTTGTTGAAGCCAATAATCGGCGTATTCATCAGAAAATTCTTATAGTGCCGGGTGGACAACAACAAGCACAAGATGGACAAATTGTAGTGGTTCGTTTAGTTGAGCAGCCTACTAGACATGATCCACCTATGGGACAAATTATTGAAATCATGGGTGAACAAGCAGCTCCCGGTATGGAAACCGATATTGCTATTCGTTCTTATGAATTACCACGTACTTGGTCTGAAGAAGTATTAGCGGAAGTTGCGAAATTACCAGATGAAGTGTCAGATGCAATGATCACAGCAGAACGGCTAGATTTGCGTCATTTGCCTTTTGTCACCATTGATGGTGAAGATGCCCGCGATTTTGATGATGCTGTATACTGCGAACCTCGTGGTAAAGGCTGGTTATTATATGTGGCAATTGCCGATGTGTCTGCCTATGTCAAACCTAATACTGCATTAGATATTGAAGCCAAAAGTCGAGGGAATTCAGTCTATTTTCCTAATCGTGTGATTCCCATGTTGCCAGAAAAATTATCGAATGGCTTATGTTCTTTGAATCCAAATATCAATCGATTATGTATGGTCTGTGAGTTAGCGATTGATTTTTATGGACGTACTCGTCGCACGCATTTTTTTGAAAGCGTTATTCGTTCTGCTGCCCGTTTGACTTACAATGAAGTGGCAGCGGTTTTAGCGGGAAAGACTAAAGATTTCAAACCAAAGTCATTATTACCGCACTTACAAAATCTGCATCAATTATATCAACTATTACGCAAACGACGTAGTAAACGCGGAACCATTGATTTTGATACCACAGAAACGCAGATTTTATTTGATAAACAACGTAAAATTCAAAAAATCGTCCCTTTACATCGTAATGATGCGCATAAATTGATTGAAGAAATGATGTTAGCTGCAAATGTGGCAACTGCAAAATGGTTATATGACCATGAAATGCCCGTGTTATATCGTAATCATGAAGGACCTACTACAGAGAAATTAACTGAATTACGTGCATTTTTAGCGGAATTTAGTTTGCGATTGGATGGCAAAGATAAACCAACAGCTTCACATTATGCAAAAATTATTGAGCAATCAGAAAAAAGACCAGACAAACGGTTGATTCAAACTGTATTATTGCGAAGTATGCAAATGGCAGTTTACAGTCCTGAAAACAAAGGACATTTCGGGCTATCTTATGAAGAATATGCCCATTTTACCTCGCCTATTCGCCGTTATCCTGATCTCATGGTACATCGTGCTATTCGTCATTGTTTAGCAGGAAAACCTGCGGATAAATTTGCTTATTCAAACAATGAAATGCAGTTATTGGCTGAACATTGTTCAATGACAGAACGTCGTGCTGATGAAGCCACACGGGATGTGATTGCGTGGTTAAAATGTGAATATATGCAACATAAAGTGGGTGAAATTTACAATGGCTTGGTTACTGCGGTGACTTCTTTTGGAATTTTCGTTGAATTAGATGGCATTTTTGTAGAAGGTTTAGTTCATGTAACCGCACTAAGAGACGATTATTATCACTTTGATCCCATTAGACATCGTTTATGGGGAGAATCCAGTGGTACGGTATATCGATTGGCGGATATTGTGCGAGTGCGTGTGGTACGTGTGGATTTAGAAGATAAAAAAATTGATTTTGATTTGGTGTAA
PROTEIN sequence
Length: 724
MSRRKSPSKSDPFAEREAEKYAKPIPSREFIMEHLACVGKPLNLNMIAEIFHLSHEDDLEALRRRLRAMERDGQVIRNRRKEYGLAKKMDLVRGRVIAHPDGFGFLVPDEGGNDLFLSEKQMRSLLHGDRALANIVGIDHRGRREGALVEVLERNTSEVVGRFFHKKGIGFVEANNRRIHQKILIVPGGQQQAQDGQIVVVRLVEQPTRHDPPMGQIIEIMGEQAAPGMETDIAIRSYELPRTWSEEVLAEVAKLPDEVSDAMITAERLDLRHLPFVTIDGEDARDFDDAVYCEPRGKGWLLYVAIADVSAYVKPNTALDIEAKSRGNSVYFPNRVIPMLPEKLSNGLCSLNPNINRLCMVCELAIDFYGRTRRTHFFESVIRSAARLTYNEVAAVLAGKTKDFKPKSLLPHLQNLHQLYQLLRKRRSKRGTIDFDTTETQILFDKQRKIQKIVPLHRNDAHKLIEEMMLAANVATAKWLYDHEMPVLYRNHEGPTTEKLTELRAFLAEFSLRLDGKDKPTASHYAKIIEQSEKRPDKRLIQTVLLRSMQMAVYSPENKGHFGLSYEEYAHFTSPIRRYPDLMVHRAIRHCLAGKPADKFAYSNNEMQLLAEHCSMTERRADEATRDVIAWLKCEYMQHKVGEIYNGLVTAVTSFGIFVELDGIFVEGLVHVTALRDDYYHFDPIRHRLWGESSGTVYRLADIVRVRVVRVDLEDKKIDFDLV*