ggKbase home page

ar4r2_scaffold_136_21

Organism: ALUMROCK_MS4_Chromatiales_58_29_curated

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: comp(22474..23289)

Top 3 Functional Annotations

Value Algorithm Source
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 257.0
  • Bit_score: 297
  • Evalue 3.90e-78
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 257.0
  • Bit_score: 297
  • Evalue 1.90e-77
tRNA pseudouridine synthase A n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00035F8A69 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 257.0
  • Bit_score: 294
  • Evalue 8.80e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
GTGAACACGCCTGCGCGTGATGAGACGGAGCGTAAGTCGACACGGCTGGCGCTAGGTATTGAGTATTTGGGGGCGAACTATCACGGCTGGCAGATTCAGCCTGTGGTGGATAGCGTGCAAGCCCGGTTGCAGCAGGCGCTAGGCCGTATCGCCAATCACCCGGTCGAGCTGGTTTGCGCCGGACGCACCGATCGCGGGGTGCACGCGACCATGCAGGTGGTGCACTTCGATACTCAGGCCAAACGTAGTCTTCAGGCCTGGCAGCGCGGCACGCTGAGCGCTTTGCCCAATGATATCGGGGTGCTCTGGGTGCGTCCGATGAGTGATGATTTTCATGCGCGTTTCAGTGCAGTGAGCCGAAGCTACCGCTACGTGCTTTATAACGCCGATCACCGCCCGGGCTTGCTGCATGGGCGGGTGAGCTGGTTTCATCTGCCGCTTGACGCGGAACGGATGCAGCGCGCGGCTTTACATCTTCTGGGTGAGCACGATTTTTCCAGCTTTCGCGGGCGCGACTGTCAGGCGCATTCGCCGGTGCGCAGCCTTTATGAGCTTAAGGTTCAGCGCGAGGGCGAGTTCATTTATTTTGATGTCCGCGCCAATGCCTTTTTGATGCACATGGTGCGCAATATGGTCGGAACCTTGATGCAGGTGGGGACGGGCAGGCGCGAGCCGGAGTGGGCAGCAAGCGTATTGGCGGAGCGGCGGCGCGAGGCAGCGGGAATCACTGCACCGCCCGACGGCCTGTATCTGACTCATGTGGCCTACCCTGAGCGCTTTGGTTTGAATCTGTCAGTTCGCTTGCCCAGGTTTTGA
PROTEIN sequence
Length: 272
VNTPARDETERKSTRLALGIEYLGANYHGWQIQPVVDSVQARLQQALGRIANHPVELVCAGRTDRGVHATMQVVHFDTQAKRSLQAWQRGTLSALPNDIGVLWVRPMSDDFHARFSAVSRSYRYVLYNADHRPGLLHGRVSWFHLPLDAERMQRAALHLLGEHDFSSFRGRDCQAHSPVRSLYELKVQREGEFIYFDVRANAFLMHMVRNMVGTLMQVGTGRREPEWAASVLAERRREAAGITAPPDGLYLTHVAYPERFGLNLSVRLPRF*