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This organism can only be binned in the context of its binning project Mp_Bioreactor_2. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

ar4r2_scaffold_1682_8

Organism: ALUMROCK_MS4_Doudnabacteria_32_13_curated

near complete RP 43 / 55 MC: 4 BSCG 44 / 51 MC: 3 ASCG 7 / 38
Location: 8493..9407

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase n=4 Tax=Lactobacillus jensenii RepID=C2E2L7_9LACO id=13477 bin=ACD18 species=Lactobacillus jensenii genus=Lactobacillus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 307.0
  • Bit_score: 223
  • Evalue 2.10e-55
formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 304.0
  • Bit_score: 211
  • Evalue 3.10e-52
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_36_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 305.0
  • Bit_score: 320
  • Evalue 1.80e-84

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Taxonomy

R_OD1_Nomurabacteria_36_29 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGCCTGAATTACCAGAAGTAGAAGCCTTAAGATTGGGTTTAGTCAAATCTTTAATCAATAGGAAAGTGGTTGACATTGATATATTATATCCAAAAATTGTTTGTGGTAAAGGTACATCTAGAACGGTTGACTCAATAATTGTGGAGAGGTTTAAAAAACTTATAATAGGCAATAGCTTTGTATCAATAAAACGTAGGGCTAAAAATTTAATAATTGAATTATCTAATGGAGCTATTGTGCTGGTACACCTTAAAATGACTGGGCAATTGGTTTATATGGCACAAAATTGTGATCCTGTCTCTGGTGGTCATCCGATAGAAATTTCAACAGAAAAATTACCAAACAAGCACACTGCGATAGTTTTTACGTTGGACGATGGGAAGCTTTTTTATAACGATGTTAGAAAATTTGGATATGTTTTGTGTTATGAAAATAAACAAGATTTTGAAAAGTTGGATCATTTTGTAGGTTTAGGGCTGGAGCCTTTAAATGAATCTAAAAGTGTTCATGCGGGTTTTAGCTTTGAGAAATTTACACAGAATATGAAAAAACAAACTGGTGTTTTGAAAAAGATTTTCTTAGAACAAAAGGTTGTTGTTGGTTTGGGTAATATTTATTCAGATGAGGTGTGTTTTGCTGCTGGGGTTATGCCAGATAGAAAAGTCGAAAGTCTGAAAAAATTTGAAATTGAAGCTTTGTATAACGAAATAATAAGAATACTACCCTTAGCCGTCAACTTGGGTGGGTCTAGTATTGCAAATTATTTGTTAGTTGATGGTTCTCGTGGAAATTATGCGAGAGAGCATAAAGTTTATCAAAAAAGCGGACAAAAATGTGTTACATGTAAAACTATCTTGGCTAAAACACAACTAGCTGGTAGATCTACCGTGTATTGCCCAAAGTGCCAAAAATAA
PROTEIN sequence
Length: 305
MPELPEVEALRLGLVKSLINRKVVDIDILYPKIVCGKGTSRTVDSIIVERFKKLIIGNSFVSIKRRAKNLIIELSNGAIVLVHLKMTGQLVYMAQNCDPVSGGHPIEISTEKLPNKHTAIVFTLDDGKLFYNDVRKFGYVLCYENKQDFEKLDHFVGLGLEPLNESKSVHAGFSFEKFTQNMKKQTGVLKKIFLEQKVVVGLGNIYSDEVCFAAGVMPDRKVESLKKFEIEALYNEIIRILPLAVNLGGSSIANYLLVDGSRGNYAREHKVYQKSGQKCVTCKTILAKTQLAGRSTVYCPKCQK*