ggKbase home page

ar4r2_scaffold_3721_2

Organism: ALUMROCK_MS4_Desulfocapsa_53_168_curated

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38
Location: comp(360..4016)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. Tol-SR.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 1217.0
  • Bit_score: 1484
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P920_DESSD similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 1205.0
  • Bit_score: 1471
  • Evalue 0.0
  • rbh
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 1205.0
  • Bit_score: 1471
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfobulbus sp. Tol-SR → Desulfobulbus → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3657
ATGTCAACCCAGCTTACAGACCTCCTGTCACTTACCGGCCAGCTCCAGAACAAACTCACCGTCACCGAACTACGGGGCAGCAGCCCCGCCCTGCTCGTCAGCCTGCTCGCCGCCGAGGAAAACTGCTGCTGCATCGTCCCCGATGAGCATCAAGTGGGCATCCTGGAGGAGGATCTGCGCCTGTTTACCAGCGTTCCTGTTCTTACCTGCCCCGGCTACGACATCCCCCCTTATAGCCCGCTATCCCCTGATCAGCAGAGCACGACTGCCCGTATAGCCACCCTTTATCAACTCCTGGACACCACCACCCGTTTTATCCTCATTGTCTCCGCCGAAACCCTGACGCGGCGGCTGTTGCCAAAGGAGATCCTGGCCCAATCCGCGGAATTGATCATGGCCGGGGAAGACTATGCCCAGGATGAACTGATCTCCGGCCTGATCCGCCTCGGATATGAATCCGTCTCTTTGGTTCAGACGGTGGGGGATTTTTCCGTGCGCGGTGGGATCATCGACATCTACCCGCCTCCCTTTCTCCATGCCGGCACTACGCTGCACGAGGGCCCCATCCGTCTGGATTTTTTCGGCGATACCGTCGAATCCTTGCGCGCCTTTGACCCTGTCACCCAGCGCTCGCAACAGGAGCTGCGGGAGGCCGTTCTCCTGCCGGTCAGCGATATCCTCTTTCCCGCCTCGGACGCAGCCCTTGCCGCCATTTCCGAGCGCCTTGCCGAAACCGGGGCCGACCGGCAATGGGACAGTGAACAGACCAGACATCTCCAAGAGCAGATAGAACGCCGGTATCGCTTTGCCGGCATTGAGTTTTTCCTGCCTCTTTTTTATCCAGATCCCGACCAGGCGCCGGCAACAGCACTGTCCTATCTTCCTTCCAACACCAGGCTTATCGCCATTGATCCCGCGAGCGGACGTAAGGCCGCCGAACTTGTGCATGAACGGGTTCTGGCCAACTTCTCCGTAGCCCGGGAAAAACAGACCCCGGCCCTGTTACCGGAGCAACTGGTCCTGACTCCTGAACAGCTTGATGCGGAGATAGCCGGCTTCAGCCGGATTTTCTGTGCCGACTTCCCTGACCAGGGAGAAAACTCCTTTGCCCTGACCACCACCAATCATCAACTGCTCAAACAGGATATCAGCCTGCAACGAAAAAAACGGGGGCTTCTCGGGCCGCTGAATGATCAGATTCGCGCCTGGCAGGAACAGGACGGCCGGATTATTCTCTGCTGCCGATCTCCCCGGCACGCCGCCAACCTCAAAGAGCTGCTTGAAAATCACCATCATACCGTCAAGTTTTTACCAGCTCCGCTTGACCCGCTGCAGCCCGCCCCCGACAACCCGAAAAAAGTCCTTTTTCTCTGCGATCATCCCTTAAGCGAAGGCTTCACCCTGGTTGACCGGAAGATTCACCTGCTCTCCGAGAGTGAACTGTTCGGGGAGATGCGGCTGGGCACCAAGGGCAGCAAGAAAAGAAACCGCAGCGGCCTGGGCGATCCCGTGCGTTTTGCCGAACTCAGGGACCAGGATATCGTGGTGCACCGTGATCATGGCCTGGGCATCTACCACGGCCTGCTCACCCTGGAGATCCAGGGAATCAAGAATGACTTCATGCTCATTGAGTATAAAGGCGGCGACAAGCTCTACCTGCCGGTGGACCGGCTTAACCTGATCAGCCGCTATGAGGGGCTCTCCGACCGGGAACCGAAGATTGACAAACTGGGCACCCAGTCCTGGCAAACCGCCAAGACCCGGGTCAAGGAGGAGGTGTGGAAGATCGCCCAGGAACTGCTCAATATCTACGCCCAGCGTGAGATCCGGCAGGGCAGACGCTTTTCTCCTCCCGGAGAGCTGTTTCACGAACTGGAAGAGTCCTTTCCCTACGATGAAACCCCCGGTCAGGACAAGGCCATCACCGAAACCATTGATGATCTCACCGCCGATCAGCCCATGGACCGGCTCATCTGCGGCGATGTGGGCTATGGCAAGACCGAGGTGGCAGTCCGCGCCGCCTTCAAGGTGGTGGAGGATGGCTGCCAGGTGGCCATCCTGGTGCCGACCACGGTTCTGGCCGAACAGCATCTCAAGACCTTCAAGGAACGGATGGCGGGCTTTCCGGTGACCGTTGACTGCATCAACCGTTTTCGCAGCAGCAGCGACCAGCGCCGGATCATCCGGGAGCTGGCGGAGGGGAAAATCGACATTATCATCGGCACCCATCGCCTGCTCTCCAAGGATGTGGTCTTTCGCAATTTGGGGCTGCTGATTGTCGATGAAGAGCATCGCTTCGGGGTCAGCCACAAGGAAAAGATCAAGAAATTCAAGGCCGAGGTGGACATTCTCACCCTCACCGCCACCCCCATTCCCCGCACCCTGGAGATGTCGCTGCTGGGAATCCGCGATCTCTCCGTCATCTCCAGCCCGCCGGAACACCGGCGGCCGGTCAAGACCTTTGTCGCCCGCTATGATGAACTGGTGATCAAGGAGGCGGTGAGCAAGGAGATGCGCCGCCAGGGCCAGGTCTTCTTTGTCCACAACCGGGTCAAATCCATCCACCGCATGGCCGCCACCGTCCAGGGCCTGGTGCCCGAGGCCCGCATCGGCGTGGCCCACGGCCAGATGGACGGCAAGGATCTCGAAGCCATCATGGTTGATTTTGTCAGCGGCAAAATCGACGTGCTGATCTGCACCACCATTATTGAATCGGGCCTGGACATTCCCTCGGCCAATACCATTATCATCAACCGGGCCGACACCCTGGGACTGGCCGAGATCTACCAGCTGCGCGGCCGGGTTGGGCGCTCCAGTACCCAGTCCTACGCCTACCTGCTGGTCCCCTCAACAGATGATCTGAGCCGTGATTCCCGCGACCGGCTCCAGGCCCTCATGGACTGCAATGAACTGGGGGGCGGATTCAAGCTGGCCATGAGCGACCTGCAGATCCGCGGCGGCGGCAACCTGCTGGGAGTCTCCCAGAGCGGCCATATCGCCGCCATCGGCTACGAACTCTACCTCGACCTGCTGCAAACCACCGTGGCCGAACTCAAGACCATGGCGGCCTGCGCCGACACGGCGGAATCGGGGAGTATCGAGGAACTTGATCCCGAAATCAACCTCCAGATCTCGGCCTACATCCCCGAGTCCTATATTCCGGACGTGAGTCAACGTTATGTCGCCTATCGGCGGATCTCGGCCCTGTCCACCGCTGATGACGCCCAGTACCTCGATCTTGAGGATGAACTCGTTGACCGCTACGGGCCCCTGCCCGCCGAAACCGTCAATCTTCTACAGGTGGTCGGCCTGAAGAAGGAAATGGCCGCCCTGAAGATCAGCAAACTGGAGAAGGGCAAAGACGCCCTGGTCTTTTCCTTTCTCAAGACCACCCCCATTGCTCCGGCCCGGCTGCTGGAATACCTCCAGACCAAGGCCGCTGCCCATGGTTTTGCAAACAAGCGGCAGGCCCTCAAAAGAAAGCCCCCAATCCCGGCCCGTCCGGCAGCGGAGAGTCCCGTTGCCCGTCTTACCCCGGATGGCAGACTGCTCGTTCCCGTTCAAGCCGCTTCTCCCAACGATCTCTTTTCGGCTATCCGTAATATTCTCAGCGACTTGGGCCAACTCGTCCCAATCTCGGTGGAGCAAAGCTCATGA
PROTEIN sequence
Length: 1219
MSTQLTDLLSLTGQLQNKLTVTELRGSSPALLVSLLAAEENCCCIVPDEHQVGILEEDLRLFTSVPVLTCPGYDIPPYSPLSPDQQSTTARIATLYQLLDTTTRFILIVSAETLTRRLLPKEILAQSAELIMAGEDYAQDELISGLIRLGYESVSLVQTVGDFSVRGGIIDIYPPPFLHAGTTLHEGPIRLDFFGDTVESLRAFDPVTQRSQQELREAVLLPVSDILFPASDAALAAISERLAETGADRQWDSEQTRHLQEQIERRYRFAGIEFFLPLFYPDPDQAPATALSYLPSNTRLIAIDPASGRKAAELVHERVLANFSVAREKQTPALLPEQLVLTPEQLDAEIAGFSRIFCADFPDQGENSFALTTTNHQLLKQDISLQRKKRGLLGPLNDQIRAWQEQDGRIILCCRSPRHAANLKELLENHHHTVKFLPAPLDPLQPAPDNPKKVLFLCDHPLSEGFTLVDRKIHLLSESELFGEMRLGTKGSKKRNRSGLGDPVRFAELRDQDIVVHRDHGLGIYHGLLTLEIQGIKNDFMLIEYKGGDKLYLPVDRLNLISRYEGLSDREPKIDKLGTQSWQTAKTRVKEEVWKIAQELLNIYAQREIRQGRRFSPPGELFHELEESFPYDETPGQDKAITETIDDLTADQPMDRLICGDVGYGKTEVAVRAAFKVVEDGCQVAILVPTTVLAEQHLKTFKERMAGFPVTVDCINRFRSSSDQRRIIRELAEGKIDIIIGTHRLLSKDVVFRNLGLLIVDEEHRFGVSHKEKIKKFKAEVDILTLTATPIPRTLEMSLLGIRDLSVISSPPEHRRPVKTFVARYDELVIKEAVSKEMRRQGQVFFVHNRVKSIHRMAATVQGLVPEARIGVAHGQMDGKDLEAIMVDFVSGKIDVLICTTIIESGLDIPSANTIIINRADTLGLAEIYQLRGRVGRSSTQSYAYLLVPSTDDLSRDSRDRLQALMDCNELGGGFKLAMSDLQIRGGGNLLGVSQSGHIAAIGYELYLDLLQTTVAELKTMAACADTAESGSIEELDPEINLQISAYIPESYIPDVSQRYVAYRRISALSTADDAQYLDLEDELVDRYGPLPAETVNLLQVVGLKKEMAALKISKLEKGKDALVFSFLKTTPIAPARLLEYLQTKAAAHGFANKRQALKRKPPIPARPAAESPVARLTPDGRLLVPVQAASPNDLFSAIRNILSDLGQLVPISVEQSS*