ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

ar4r2_scaffold_1635_5

Organism: ALUMROCK_MS4_Desulfocapsa_53_168_curated

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38
Location: comp(2222..3124)

Top 3 Functional Annotations

Value Algorithm Source
Sirohydrochlorin cobaltochelatase n=1 Tax=Prevotella amnii CRIS 21A-A RepID=E1GY53_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.1
  • Coverage: 299.0
  • Bit_score: 170
  • Evalue 1.60e-39
Sirohydrochlorin cobaltochelatase {ECO:0000313|EMBL:KGF50860.1}; TaxID=1401066 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella amnii DNF00058.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 301.0
  • Bit_score: 171
  • Evalue 1.70e-39
cobalamin (vitamin B12) biosynthesis CbiX protein similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 195.0
  • Bit_score: 125
  • Evalue 2.20e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Prevotella amnii → Prevotella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAAAATATTTATCTTCAATTCATGTTGATTTTCATGGCGGTATCAATTCCGTCTCTGGCGCTTGCCGATCCTGGATTGTTGCTGGTGGCGCACGGCTCGTCAAACCCTGAATGGAACAAGCCTGTCCTCGAACTGGGGAAGCGTATTTCAACGGAAGCGGCCAAACGAAGAAAATTCAAGTCGGTTCAAATCGCATTGATGGAGGCGGCTCAACCAGATATACCAACAGCTGTGTCGCAGCTTGAAGCGGCCGGCTGCGATCACATTATCGCCGTTCCTTTATTTATCGCTCCGACAAGCCATACACATTTTGATGTTCCAGCGGCGCTGGGCGTTTACTCGTCACCAAAGACAACGGCAGCTCTCAAGCAAGAAGGAACTGCGGCCGTACGATCCAGAGTTCCCATCACCCTGACCCAGACTGTTTCGGAGGATGATATCATTCTCAACTATGTTGTCCAGGAGGTGAAAAAACTCTCGAAATCGCCACAGGAGGAAGCTTTAATTCTATTAGCGCACGGCGATCCCGATCATAATCTGCTTGTTGATCGGCTGATGCGCCGCATTGCGACTTATTGCAGTGGTGAAACAGGAATTGGTTATGGCGACTGGGCTTTTATTCGCGTCGGACAAGAATACCGGCATAATGGTGTGCCAGTCATTGAGACCGCCCTGCAATATCGAAAACGGGTACTTGTCGTCGGGCTCTATCTCTCTATCAGTGCTGACAGTATCCATCAGCGGCAGATGTCCGCAAAGTCAAACAAGGGAATCGTTACGGATCTGTTTGCCGGCAAGGATGTCGTATTTTCTGAGGCAACGGTTATTCAGCATCCAGAGTTTATCAGTTGGGTGCTGGACAGCGCCTGCGCGGCTATTCCTCCAATCGTTGCCGAATAG
PROTEIN sequence
Length: 301
MKNIYLQFMLIFMAVSIPSLALADPGLLLVAHGSSNPEWNKPVLELGKRISTEAAKRRKFKSVQIALMEAAQPDIPTAVSQLEAAGCDHIIAVPLFIAPTSHTHFDVPAALGVYSSPKTTAALKQEGTAAVRSRVPITLTQTVSEDDIILNYVVQEVKKLSKSPQEEALILLAHGDPDHNLLVDRLMRRIATYCSGETGIGYGDWAFIRVGQEYRHNGVPVIETALQYRKRVLVVGLYLSISADSIHQRQMSAKSNKGIVTDLFAGKDVVFSEATVIQHPEFISWVLDSACAAIPPIVAE*