ggKbase home page

ar4r2_scaffold_2258_10

Organism: ALUMROCK_MS4_Desulfocapsa_53_168_curated

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38
Location: 5596..8994

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase/exodeoxyribonuclease V, gamma subunit (EC:3.1.11.5) similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 1058.0
  • Bit_score: 944
  • Evalue 1.90e-272
  • rbh
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 1058.0
  • Bit_score: 944
  • Evalue 9.50e-272
DNA helicase/exodeoxyribonuclease V, gamma subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P5P7_DESSD similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 1058.0
  • Bit_score: 944
  • Evalue 6.80e-272
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfocapsa sulfexigens → Desulfocapsa → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3399
ATGTTCTACCTCCATCTCTCCAACCGCACCGAAAACCTGCTCGCCCGGCTGGTTGCCGTTCTCCGCGACCAGCCGCGCCGCGACCTGTTTGCCCGGGAGATCTTTCTCATCCAGAGTCAGGGCATGGAGCGGATGCTTTCCCAGCGGCTGGCCGATGTCCTCCCGGTGTGGTGCAACTTTGAATACCTGCTGCCCACCCGCTTTTTTGATCACATGGCCGCCCGGCTGGGGCTGGAGATCAACCCCGACGCCTTTAACCGCGACACCCTGGCCTGGCGCATCGATGCCCTGCTCCATGAAATCGCCCGGCAGGAGCGGCAGGAAGCGCAGCCGCTGTTTGCCCCCATCCTCCGCTACCTGAGCGGCGAACAGGCCGACCTCAAAGGCTTTCAGTTGGCCCAGCAGTTGGCCAACCTCTTTGACCAGTACCAGATCATGCGGCTGGAGATGCTGGACGGCTGGCAGGAGGGGAAGACCGGCACCGGTAATCCCGCCGAGGCCTGGCAGATGGCCCTGTGGAAACAACTCACCGCCGCCCTGGAGCACAGCCCGCACCGGGGCGAGATGCTGCGCCTCTTTCTCACCCGCCTGCACGGCCCCGATGACCTGAGCGGAATCCTGCCGGAGCGGATCTCCATCTTCGGCCTGCACAGCATGCCGCCCCTGCTCCTCGACTGCCTGGCCGGGGTTGCCCGCCACTGTGATGTCCATTTCTATCTGCTTTCGCCCTGCCGGAACTACTGGGCCGACATCCCCGGAAAGCGGCAGTTGATCCGGGAGAACCTGGCCCTACTCAAATCCGGGCGCGAGGCCGCCGGTCTTGAACCCGGTGTTCACCCCCTGCTGATCTCCCTGGGCCGGCAGGGCCGGGATTTTCAGACCATGCTCCTGGAGCGGGTTGACGAGCTTATCGACACCGACAGCTTTGTTGACCCCGCCGCCCATGGCCCCAATGCCCCCAATGCCCCCAATGCCCCCCGCCCGCCCTGTCTGCTGCACCGCCTCCAGTCCGATCTGCTGGACGGGGGCTGGAGCGGGGAAAATGACGGGGAGCCGCTGCCCCTGGATGATTCGCTGACCATGGTCTCCTGCCACTCGCCGGTGCGGGAGGTCATGGTGCTCAAGGATCAGATCCTGCACTGGCTCCAGGACAATCCCGATCTGGAGCTGCGCGACATCGTGGTCATGGCCCCGGACATCCAGGAGTACGCCGCCATTATCCCGGCCATCTTCCATGACATCCAGCACTCCATCGCCGACCGCAGCCTGCGCCACCGGAACCGGGTGCTGGCGGTCTTCTTCCAGTTCCTCGATCTGGCCGTCAGCCGCTGCCCGTGGAGCGGCGTCCTCGACCTGCTGGAACAACCGGAAATCGCCGCCGCCTTCGGGGATCTCAGCGAGGCCGACATCGAGCTGATCCGCCACTGGGTGACCAGCGCCGGCATCCGCTGGGGGCTTTCCAACGACCAGCTCCAGGCCATGGGGCTGCCCCCGGCGGCGGAGACCACCTGGCAGGCCGGGCTGGACCGCCTGCTCCTGGGCTATGCCATGGCGTGGGACGCGCCGGTGGACGGGGTGCTGCCCTATAATGATATCGAGGGCAGTCAGGCCCGGCCCTTGGGCGAATTGTGCCGGTTTGTCGAGCTGCTCATGCAGGCCGCCAAAGACCTCTCCCGGCCCCGGCCCCTGGCCGCCTGGTCATCCCTGCTGCTCTCCCTGGCCGAATCCCTCTTCAGCCCGGACACGGGCGACGAGTTCGTCCACCTGCGGGAAATCCTCACCGATCTGGACTTGCGCTTCGGCGGCCTGCACCACCACGATGTCCCCTTAGAGGTGATCCGGGCCTGGCTGACCACCACCTCCTCGGAAAGCCGCACCAGCTCGGGATTCCTGCGCGGCCGCCTCACCTTCTGTTCCATGCTGCCCATGCGCTCCATCCCCTTTCGCGCCGTCTGCCTGCTGGGATTAAACGACGGGATCTTCCCCAGCACCGACCGCCATCCCCCCTTCGACCTGCTGGGCGAAAACTTCCGTCCCGGCGGCACTGGGGCGTCCATGCCCGGAGATCGCTCCCGGCGCAGCGATGACCGCTGCCAGTTCCTGGAGGCCCTGCTCTCGGCCCGGCAGTATCTGTATCTCAGCCATGTGGGCCAGTCCATTCGCACCGGCTCGGTCATCCCGCCCTCGGTACTGGTCACCGAACTGGTCGAGACCCTCAGACTGGCCTACGGGATTGATGATCCCGTGGTCAAGCACCCGCTGCAACCCTTTTCCCCCCGCTATTTCCGGGGAAACGGTCTGTTCAGCTATAGCGGGCATCATTGCGCGGCGGCCCGCGCCCTGCTCCATCCCCTGCCGCCCGCAAGCCCGGCGCCATGGTGGACAACCACCCTGCCCGAGGATGACAGCGGAACGATCACCATCGCCGAACTGCTCGGCTTCTTTGCCCATCCGCAGCGCTGGTTTGTCCGCAACCGCCTTGATATCCACCTCGACACCGAGGCTGAATTGCCCGAGGGAAACGAGCCCTTTGCCGTGTCCGGGCTGGACGGCTATCTGGTTAACCAGGAGCTGGTGCAAGGCCTTCTCGAACCTGCGGAAACCCCACAAACCGACATCCTTGTCAAGCTGAAGGCGCAAGGCCGCTGGATGCTGGGCACGCCCGGACGGCTGGCCTTTGACGGCCTGCTTCCGGAACTCCAGGGTTTTGCCGGAAAAATCAGGGCCCTGGACATGGGGACCAAACTGCCCGATCTGCCCATTGATCTTGAAATCAACGGCTATCGCCTGCTGGGCCGCCTCGAAAGCGCTTACGAAAAGGGCATTCTCCTTTTCCGCTACAGCGCCTGCAAGGGCAAGGATCTGCTCCGGGCCTGGATTCATCACCTGCTGCTCTCAGCCGCCGCGCCCGGTCAGCCGGTCATGACCCATCTGCTCTGCCGTGACCACGCATTTCATTTTACCCCCATTGCCGACCCTTCTCCCCACCTGGCCGGCCTGATTGAACTCTTCCGCCAGGGCAGCCATGGCCCCAGCCCCCTTCTCGTTGAACCGGCCTGGAGCTATGTCCTGCAAAAGGTAAAGTCCCGGACGACCATCACCCCCTTGCAGGCGGGTCGCCCTTCCGCCGGTCGCTCCTGCGCCATCCCTGGCGCCCGCGACACTGGGCCATCCCTGGCCGGCGGTCGCTCCTGCGCCATCCCTGGCGCCCGCGACACTGGGCCGTCCCTGGCCTGCGCGCACAAGAAACTCCAGGAAGACCTGGACAGGGATCATGAAACCGAACTGCGCCTGCTCTATGGAGATTGTGATCCGGCCGACCTGCTGGGCCCGGAATTCCAGCACCTGTGCGAGGATTTTCTTGTTCCCATCTTCATCAAAGGGAGGGAAAATCGATGA
PROTEIN sequence
Length: 1133
MFYLHLSNRTENLLARLVAVLRDQPRRDLFAREIFLIQSQGMERMLSQRLADVLPVWCNFEYLLPTRFFDHMAARLGLEINPDAFNRDTLAWRIDALLHEIARQERQEAQPLFAPILRYLSGEQADLKGFQLAQQLANLFDQYQIMRLEMLDGWQEGKTGTGNPAEAWQMALWKQLTAALEHSPHRGEMLRLFLTRLHGPDDLSGILPERISIFGLHSMPPLLLDCLAGVARHCDVHFYLLSPCRNYWADIPGKRQLIRENLALLKSGREAAGLEPGVHPLLISLGRQGRDFQTMLLERVDELIDTDSFVDPAAHGPNAPNAPNAPRPPCLLHRLQSDLLDGGWSGENDGEPLPLDDSLTMVSCHSPVREVMVLKDQILHWLQDNPDLELRDIVVMAPDIQEYAAIIPAIFHDIQHSIADRSLRHRNRVLAVFFQFLDLAVSRCPWSGVLDLLEQPEIAAAFGDLSEADIELIRHWVTSAGIRWGLSNDQLQAMGLPPAAETTWQAGLDRLLLGYAMAWDAPVDGVLPYNDIEGSQARPLGELCRFVELLMQAAKDLSRPRPLAAWSSLLLSLAESLFSPDTGDEFVHLREILTDLDLRFGGLHHHDVPLEVIRAWLTTTSSESRTSSGFLRGRLTFCSMLPMRSIPFRAVCLLGLNDGIFPSTDRHPPFDLLGENFRPGGTGASMPGDRSRRSDDRCQFLEALLSARQYLYLSHVGQSIRTGSVIPPSVLVTELVETLRLAYGIDDPVVKHPLQPFSPRYFRGNGLFSYSGHHCAAARALLHPLPPASPAPWWTTTLPEDDSGTITIAELLGFFAHPQRWFVRNRLDIHLDTEAELPEGNEPFAVSGLDGYLVNQELVQGLLEPAETPQTDILVKLKAQGRWMLGTPGRLAFDGLLPELQGFAGKIRALDMGTKLPDLPIDLEINGYRLLGRLESAYEKGILLFRYSACKGKDLLRAWIHHLLLSAAAPGQPVMTHLLCRDHAFHFTPIADPSPHLAGLIELFRQGSHGPSPLLVEPAWSYVLQKVKSRTTITPLQAGRPSAGRSCAIPGARDTGPSLAGGRSCAIPGARDTGPSLACAHKKLQEDLDRDHETELRLLYGDCDPADLLGPEFQHLCEDFLVPIFIKGRENR*