ggKbase home page

ar4r2_scaffold_11315_6

Organism: ALUMROCK_MS4_Desulfocapsa_53_168_curated

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38
Location: comp(2642..3073)

Top 3 Functional Annotations

Value Algorithm Source
NMD protein affecting ribosome stability and mRNA decay n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8L1_DESSD similarity UNIREF
DB: UNIREF100
  • Identity: 65.5
  • Coverage: 142.0
  • Bit_score: 209
  • Evalue 1.20e-51
NMD protein affecting ribosome stability and mRNA decay similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 142.0
  • Bit_score: 209
  • Evalue 3.30e-52
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 143.0
  • Bit_score: 220
  • Evalue 9.20e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 432
ACCTATGCGGAACAGGAAAAATGGCCGGAACCCACTGTTTGCAGCGAATGCGGCGCGGTATTCAATGAAGGACGGTGGGCGTGGCTGGAACCGCCGCCGGACAAGGCCCACATGATTGTCTGCCCGGCCTGTCAGCGGATCAAGGATAACATCCCGGCCGGGTACCTGGAGATACGGGGCGCCTTCTTCGAGGATCATCGCGAGGAGCTGCTGAATCTGATTTACAATCTTGAGGCCCAGGAAAAAGGGGAACACCCCATGGAGCGTTTGATGGACATCAGCGGCGAAGAAGACCATACGCTGATAACCACCACCGGCATCCATCTGGCCCGGCGCATTGGCGAGGCCCTGAAGCACGCCTATCAGGGAGAGCTTGATTTCACTTACGGGGACGGGGAAAAAATGATCCGCGTGACCTGGCTCCGCGAATAA
PROTEIN sequence
Length: 144
TYAEQEKWPEPTVCSECGAVFNEGRWAWLEPPPDKAHMIVCPACQRIKDNIPAGYLEIRGAFFEDHREELLNLIYNLEAQEKGEHPMERLMDISGEEDHTLITTTGIHLARRIGEALKHAYQGELDFTYGDGEKMIRVTWLRE*