ggKbase home page

ar4r2_scaffold_3247_2

Organism: ALUMROCK_MS4_Desulfocapsa_53_168_curated

partial RP 38 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 12 / 38
Location: 687..2894

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 734.0
  • Bit_score: 833
  • Evalue 2.40e-239
  • rbh
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 734.0
  • Bit_score: 833
  • Evalue 1.20e-238
Ribonuclease R n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PFM6_DESSD similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 734.0
  • Bit_score: 833
  • Evalue 8.40e-239
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Desulfocapsa sulfexigens → Desulfocapsa → Desulfobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2208
ATGCAAAAAAAAAGAAAACATTTTCCTCGAAAGCCATCAGGAAGACGGCATGTTATAGAATCGGCCCGCCCCGTGGCATCACGACTGGAAAAGTCTCTGGAATGGGATGTGCTCACGTATGTGTATGGCAGCGAGCAGGCTGTCTCACAAGCGGATATCGTTGCCGAATTCCAGCTTGACCGGAGGAGGCAGAAAGAATTGGTGCTTCTTCTTGCTGACCTGGTGGGCCGGAGAATTCTGAGTCTTACCAGTAAAAAGAGGCTTTCACTGGGCAAACAAAGCAGCTTGGCTACCGGAGTGCTTGAGCAGAATCCGCGTGGTTTCGGGTTTGTCACCGGGGTTTCGGCCCGGGGTGAAGGAGGGGCTTACAGCAAAGATCCATCGGTTGAGGCCTCCCGTATGGGGGCTGCCCGGCATGGTGATACCGTCCTGATTCAAGTGCTCAAGGTCCGCCAGGATGGGCGTCCCGAGGCTGAGGTGATCAGTGTTCTGAAGCGGGGCTCCGATCGTCTGGCCGGGTTTGTCTCCTTTGAACGGAACAGGATTCGGGTTATTCCTGAGGATCCCCGTTTCCCCTTTGCGGTTTTTATTGATGGAGCTGTTCCGGCGGATGCTCAGGCAGGAGATGCGGTTATTGTTGAACTGGCCGATGAGCAGGATGAGACGGGCAGCCTGCGCGGCAGGATTATTGAAGTCCTGGGTGATCCGGATTTGATTGATGTGCAGATGCGGCTGGTGATTGAGAAATTTAAACTGCCGCACATCTTCAGCGATCAGGCGGAGCAGGAATCGGCACATCTGCCTGACGAGATTACCGAGACGAAAGGCCGGGAGGATCTGCGCGAGATCCTGCATGTCACCATCGACGGAGAAACGGCCAAGGATTTTGACGATGCCGTGGCCGTTGTCAAGACCAAAAAAGGGTTCCGGCTTTATGTCTCCATTGCCGATGTCAGTCACTTTGTGAGGCCGGGCACCGCGCTTGACAAAGAGGCTTATGCCCGTGGGACATCCATCTATTTCCCCGGCCGGGTTATCCCCATGCTGCCGGAAAAGATTTCGAACAACCTGTGCAGCCTCATTCCCGACCAGGATCGTCTTGCCTTTACCGCCATTCTTGATTTTGACCGGCAGGCCAATGTGGTTAAGAAACGCTTTGTCAAGTCCATCATCCGCAGTCATAAACGTTTTACCTATACCACAGTCCGTCAGATTCTCATCGACAACGACAAGGAGGTGCGGAGCGCGCACAAGTCCTTCCTTACCCCTCTCAAGTGGGCGGGCGAGCTGGCAGAGGTACTCCAGAAACAGCGGAAAGATCGGGGGGCCATTGGTTTTACCCTGCCGGAACCGGATATCGCCCTTGATGAGGCCGGCAGGATACGCTCCATTGGCCGGGCTGAGCGGAATTTCGCCCATCAGATCATCGAGGAATTCATGCTTTCCGCCAACGAGGCGGTGGCGGAGACCTTTACCGAACACTCGGTGAACGCGCTGTACCGGATCCATGAGCGACCCGATCCCATCAAGGTGCAGGAGTTTACCGGTTTTGCCCAGACCCTGGGGCTTCATCTTCCCAAACATCGCCAAGATCCGGACTGGTTTGGTCAGGTGTTGGACATGGTTAAAAACAGTCCCAAGGAGTATGTTATCAATAATCTGCTTCTGCGCACCATGCAGCAGGCACGGTATGACATGCGCAATGTCGGCCATTTTGGTCTGGCGGCCACCGATTATACCCATTTCACTTCTCCCATCCGCCGCTATCCCGATCTGCTCGTTCATCGCGCCCTCTATGATTTTGTCAGCAGAACCAAAGAGAATAAAAAAAATCTCAGCCCTGAAAACCTGAAAGAGATCGGCCCTTTTCTTTCCAGCCGGGAACGGGTGGCGGTGAGCGCCGAAAGAGAGATGAATGACCGGCTGAAGGTTCGGTATATGCAGGACAGGATAGGAGAGAGTTTTGACGCGGTGATCTCCGGCGTCAATGGGTTCGCCTTTTTTGTGGAATTGCTGGAACTCTTTGTCAGCGGGTCGGTGGCAATTTCTGAATTACGCGATGATTATTATATCTATGATCCGAAACACCATCGCCTCATGGGCGAAAGAAGCGCCAGGATGTACCGGCTTGGTGATCTGGTGCGGGTGACCCTGCTTGACGTGGATCCGCGAAGGAACAGGATTAATTTCACGCCGGCCAGGGAGTAA
PROTEIN sequence
Length: 736
MQKKRKHFPRKPSGRRHVIESARPVASRLEKSLEWDVLTYVYGSEQAVSQADIVAEFQLDRRRQKELVLLLADLVGRRILSLTSKKRLSLGKQSSLATGVLEQNPRGFGFVTGVSARGEGGAYSKDPSVEASRMGAARHGDTVLIQVLKVRQDGRPEAEVISVLKRGSDRLAGFVSFERNRIRVIPEDPRFPFAVFIDGAVPADAQAGDAVIVELADEQDETGSLRGRIIEVLGDPDLIDVQMRLVIEKFKLPHIFSDQAEQESAHLPDEITETKGREDLREILHVTIDGETAKDFDDAVAVVKTKKGFRLYVSIADVSHFVRPGTALDKEAYARGTSIYFPGRVIPMLPEKISNNLCSLIPDQDRLAFTAILDFDRQANVVKKRFVKSIIRSHKRFTYTTVRQILIDNDKEVRSAHKSFLTPLKWAGELAEVLQKQRKDRGAIGFTLPEPDIALDEAGRIRSIGRAERNFAHQIIEEFMLSANEAVAETFTEHSVNALYRIHERPDPIKVQEFTGFAQTLGLHLPKHRQDPDWFGQVLDMVKNSPKEYVINNLLLRTMQQARYDMRNVGHFGLAATDYTHFTSPIRRYPDLLVHRALYDFVSRTKENKKNLSPENLKEIGPFLSSRERVAVSAEREMNDRLKVRYMQDRIGESFDAVISGVNGFAFFVELLELFVSGSVAISELRDDYYIYDPKHHRLMGERSARMYRLGDLVRVTLLDVDPRRNRINFTPARE*