ggKbase home page

ar4r2_scaffold_5543_5

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: 2365..3576

Top 3 Functional Annotations

Value Algorithm Source
Integrase family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT36_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 402.0
  • Bit_score: 521
  • Evalue 3.90e-145
Integrase family protein {ECO:0000313|EMBL:EIJ34529.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 402.0
  • Bit_score: 521
  • Evalue 5.40e-145
integrase family protein similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 397.0
  • Bit_score: 333
  • Evalue 7.20e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGGATGAAGAGAAAAGGGCAAAGCTGACCGAAACCCTCATAAAGGGCATTACCTACGGCAAGGATGCTGCAAAAAATCAGCGAGATGTGTGGTGGGATACCGAACTAGAACGCTTCGGTATCCGCATCTATCCCAGTGGAAAAAAGGCGTTTGTCATTTCCTACTGGCACGGGCGAATTAAACGCTTAAAGACCATCGGCAAACATGGCTTGCTGACACTGGTACAGGCAAGGGAAAGAGCCAAGCGTGACCTTTCCATGTTGCTGGACGGTGAAGACCCGAAGGCAAAGCTCGAAGCATCCCGTAAAGCCACACTGTTTAAGGACTTCGCAGAGGATTACATCACCCGTGAGGTCATGCCGCATCATAAAGGCTGGAAGCAAGAGGTAAGCCGTATCCGTGTGCATCTGGTAAAGCATTTCGGGAATTATCCAGTAGTAAGCATTACCCACGATCAGGTAACGGATGTTCACCTTGAAATCGGCAAGACTCACCAAGCGAGTGCAAACCGCTGTATCAAGATTTTATCGCCAATGCTCACCAAGGCGGAAAAGTGGGGTGTTGTGCCTGCTGGCACACTGAACCCGGCAAAGGGCATTAGCTACTATCGTGAAATACCACGGGAACGTTATGTTACCAATGAGGAAATGCCAAGACTGATAGAAGCGATTGAACAAGAGGATATTTACATTAGCTCAGTGCTTTGGCTGTATTTATTGACAGGATTTAGAAAAAGCGAACTACTCAAAGCCACATGGTCACAAATTGATTTTGAAAACCGTCAATTCATCCTTCCAGACTCGAAAGGCGGGCGGCCTCACCATTTACCTTTGACCGTTGAAGCAATGGCGGTTATTGAAGCTATACCGCATTTACAGGGCAACTTGCATATATTCCCCGGTGCGATAGAGGGCAAGCCATTGGAAGATTTCAAAAAGCCTTGGAAACGCGTAAGGGAGCGTTCAGGGTTGGAGGACGTGCATCTTCATGACCTTAGACACACCATAGCGTCATGGCTCGTACAGGCGGGAAATTCTCTGTATTTAGTGGGTAAAATCCTTAACCATAAAGACCTTCGCACCACACAACGCTATGCACACTTTGCACCAAATGATATGCGGGATGCACTCGAAGCAACCAGCCAACGCATGACGGGAATATCTGGCAAGTCTGCTAGTGCAGATGTGGTGGAACTGCGTAAGAAAAAATAA
PROTEIN sequence
Length: 404
MDEEKRAKLTETLIKGITYGKDAAKNQRDVWWDTELERFGIRIYPSGKKAFVISYWHGRIKRLKTIGKHGLLTLVQARERAKRDLSMLLDGEDPKAKLEASRKATLFKDFAEDYITREVMPHHKGWKQEVSRIRVHLVKHFGNYPVVSITHDQVTDVHLEIGKTHQASANRCIKILSPMLTKAEKWGVVPAGTLNPAKGISYYREIPRERYVTNEEMPRLIEAIEQEDIYISSVLWLYLLTGFRKSELLKATWSQIDFENRQFILPDSKGGRPHHLPLTVEAMAVIEAIPHLQGNLHIFPGAIEGKPLEDFKKPWKRVRERSGLEDVHLHDLRHTIASWLVQAGNSLYLVGKILNHKDLRTTQRYAHFAPNDMRDALEATSQRMTGISGKSASADVVELRKKK*