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ar4r2_scaffold_35063_3

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: 1365..2696

Top 3 Functional Annotations

Value Algorithm Source
LPS-assembly protein LptD n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BN68_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 445.0
  • Bit_score: 570
  • Evalue 1.00e-159
  • rbh
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 445.0
  • Bit_score: 570
  • Evalue 1.50e-159
Outer membrane protein Imp similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 429.0
  • Bit_score: 276
  • Evalue 6.80e-72

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
TTGGGATTGTCCGCCAGCCCGACGGTTGCACTTGCCCAGACGCAATGGCTATCGTGCCCAATACCGCCCTATCCGACTGATAATATTGAACGCCCCGCCGACTTGCCTCCGCAAGCCGTACACATTAAAGCCGACACAGCGTTATTTCGTGAGCAAGGTGTGTCGGAGATGTCAGGTGATGTGCAAATATCCCAAGAAGATAAAAAAATGCGGGCAGACAAGGCAACTTACGAACAAAGCAGCTCGCAAGTGACCGGCAAGGGAAATGTAACCTTTAGCACGCCGACCCTAAAGGCCAAAAGCACAGATTTTGACTACAACTTAAATCAAGACAAAGGTGAATTGCAAAACGCCGATTACCGTTTACCAGTGACCGAAGGGCGTGGTTCGAGCAAACGCATCGTGCGCGAAAGCCCACAATTGACACGCCTTGAGCAAGCATCGTACACCACCTGCCCACCCGGAAATGCGGCATGGAGCTTAAACTCACCGAATATTCGTCTTTACCACGAGCAAGAACAAGGCACGGCAACTAATGTCACCCTCAAAATACGAAAAGTGCCTATTCTGTATTTGCCTTATATTTCTTTCCCGTTAACCGACAAGCGTAAATCAGGCTTTTTGTTCCCGGTGATTGGTTCTACGGAAAAAACCGGGATACAAGTTGGTATTCCCTATTACTTTAATCTCGCACCCAACTACGACATGACGCTCACGCCCACTATATTGAGCAAACGGGGTTTGCAGTTGGGGACAGAGTTTCGCTATTTGACGGAAAAGCACCAAGGCGAAGTGAAATACACCCTGCTGCCCAATGACAAAATCGGCACGGTTAGCAACCGTTATTACTACGACCTGAAGCACAATACCCAGATCGACGACCACTCCAGCGTTTCATTGAAAGCAGAAGGCGTTTCCGACGATCAATATTTCGTTGACTTAGGTAACTCGCTGCAAGCAACCAGTGAAGTGAACTTGGAACGTCGCCTCACCTATCAAACCAGCGGTGATAAGTGGACATTTTCCGCAATGACGCAGGATTACCAAGTCCTAGACGGCGGTACTAAACCGCACTCGCGCTTACCACAATTATTGCTAAATTACCGCCCACTGCAAAACAGCAATGGCGTAGACATGCAGATAGATACCGAATACACCAAGTTTTCAGGCAGCAAAACCGCAACTAACGGTTCACGCTTAGACCTAAAAACGACTGTCAGCAAAAACTTCGCGAACGATGCCGCTTACATCAAACCTTCCGTAAGCCTGCGCCATAGCGAATACACCTTAGACGATGCCAACAAAACCCGTGTGAGTCGCACCTTACCAACC
PROTEIN sequence
Length: 444
LGLSASPTVALAQTQWLSCPIPPYPTDNIERPADLPPQAVHIKADTALFREQGVSEMSGDVQISQEDKKMRADKATYEQSSSQVTGKGNVTFSTPTLKAKSTDFDYNLNQDKGELQNADYRLPVTEGRGSSKRIVRESPQLTRLEQASYTTCPPGNAAWSLNSPNIRLYHEQEQGTATNVTLKIRKVPILYLPYISFPLTDKRKSGFLFPVIGSTEKTGIQVGIPYYFNLAPNYDMTLTPTILSKRGLQLGTEFRYLTEKHQGEVKYTLLPNDKIGTVSNRYYYDLKHNTQIDDHSSVSLKAEGVSDDQYFVDLGNSLQATSEVNLERRLTYQTSGDKWTFSAMTQDYQVLDGGTKPHSRLPQLLLNYRPLQNSNGVDMQIDTEYTKFSGSKTATNGSRLDLKTTVSKNFANDAAYIKPSVSLRHSEYTLDDANKTRVSRTLPT