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ar4r2_scaffold_16463_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: 150..1958

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6D9S2_THICA similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 606.0
  • Bit_score: 681
  • Evalue 7.40e-193
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 606.0
  • Bit_score: 681
  • Evalue 2.10e-193
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.6
  • Coverage: 606.0
  • Bit_score: 681
  • Evalue 1.00e-192

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Taxonomy

Thioalkalimicrobium cyclicum → Thioalkalimicrobium → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1809
ATGGCATCATACGATGAACAACAGCAATTAGCGGATTTAATCGCACGTGGACGTGAACAAGGCTATCTGAATTACCAAGATATCACGGACATGTTGAACGATGAGTTCGAAGATGAAGAAAAGATTGAAGAAATTGTTGTTCTGCTAGGTGATATGGGCATCAATGTTCTTGATGACGCTGTACCTAATCCCGATATTCTAGTGCCTGGCGCTTTAGTTGATGCCGATCCTGAAGTGGCAGCGGCCAATATTTCCGACGATGGTGAGTTAGGTCGCACTTCAGATCCCGTGCGCATGTACATGCGCGAGATGGGTTCGGTTGAGTTGTTAACGCGTAAAGGCGAGATTGAGATCGCACGTCGTATCGAGTCGGGTACGCGCGATATGTTGACCTCGTTGGCACTCTATCCGCAGATGCCGAGCTTGCTATTTCAACATTTGAAGCAAGTCGAAGAGGGTGAGATTAAGCTAAGCGATTTGGTGATGGGTTTCTTAATGCCCGAACAGGAAGAAGCTGCACCAGCGCCCGAAGTTGCCGTTGCTGAAGAACATTTAGATGCTGATGATGATTCGGCAGATGGCGTGTCTAAGGAAGACCCTTATGATACTGAAGGTGTTACAGCTTTTCTGGCTGAATTACGTGAATTGCATCAGCTTGCCAGTGGTCATGAAGCCGAGTTTGGTCATGCCGATGAACGTGCTAAAACGGCACGTTTAGCGGTTGCGAGTCGTTTAATGACGGTAAAATTAGCACCTGCTTTTGTTGCTGAAGTGCTGGCTGATTTGCGTAAACATGTCGATCAAATTCGTCAGTATGAACGTATGATTATGGACTTGACGGTTGAGCAGGGTCGTTTACCTAAACAGCACTTTATTTCGACTTTCGTTGGTTCAGAAACTGATTTGGCTTGGATTGAGCGCGTTATCGCTGCCAACGTCGATGCGAGTGCAGACCGTTTAACAGCTTTGAAAGATCAAGTGACGCGTGCGCAAAAACGCTTACGTTTCTTAGAAAAACGCATTGCGATGGACATTACGTCGTTGAAAGATGTCAACCGTAAAGTGGTTGATGCTGACAGCCGCACGCGTGCCGCTAAGAAAGAAATGATCGAAGCTAACTTGCGTTTGGTCATCTCTATTGCGAAAAAATATACCAACCGTGGCTTACAGTTCTTAGACTTGATTCAGGAAGGTAACATCGGCTTGATGAAAGCCGTTGATAAGTTTGAATATCGTCGCGGTTACAAGTTTTCGACTTACGCTACTTGGTGGATTCGTCAGGCGATTACGCGCAGTATTGCCGACCAAGCGCGCACCATTCGTATTCCTGTACACATGATTGAAACCATTAACAAACTCAATCGTGTACAGCGTCAGTTGTTGCAGCAAATGGGTCGTGAACCTACTGCTGATGAATTGGCTGATGCCATGGAAATGGGCGAAGATAAGATCCGCAAGGTGATGAAGATTTCTAAAGAACCCATTTCAATGGAAACGCCGATTGGTGACGATGAAGATTCGTCATTAGGTGATTTTATTGAGGATGGCAACATGTTGTCGCCTTCAGAGTCAGCCGATAATCAAGGTTTGTCGGAAGCAGTTGAGTTGATGTTATCGACCCTCAGCCCGCGAGAAGCAAAAGTGTTACGTATGCGTTTTGGTATTCAAATGAACACCGACCATACGTTAGAAGAAGTGGGTAAACAGTTCGATGTAACGCGTGAGCGTATTCGTCAGATTGAAGCCAAAGCACTTCGTAAATTGCGTCATCCATCGCGCGCAGAAAAACTGCGCTCTTTCTTGGATTGA
PROTEIN sequence
Length: 603
MASYDEQQQLADLIARGREQGYLNYQDITDMLNDEFEDEEKIEEIVVLLGDMGINVLDDAVPNPDILVPGALVDADPEVAAANISDDGELGRTSDPVRMYMREMGSVELLTRKGEIEIARRIESGTRDMLTSLALYPQMPSLLFQHLKQVEEGEIKLSDLVMGFLMPEQEEAAPAPEVAVAEEHLDADDDSADGVSKEDPYDTEGVTAFLAELRELHQLASGHEAEFGHADERAKTARLAVASRLMTVKLAPAFVAEVLADLRKHVDQIRQYERMIMDLTVEQGRLPKQHFISTFVGSETDLAWIERVIAANVDASADRLTALKDQVTRAQKRLRFLEKRIAMDITSLKDVNRKVVDADSRTRAAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRVQRQLLQQMGREPTADELADAMEMGEDKIRKVMKISKEPISMETPIGDDEDSSLGDFIEDGNMLSPSESADNQGLSEAVELMLSTLSPREAKVLRMRFGIQMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRAEKLRSFLD*