ggKbase home page

ar4r2_scaffold_32605_2

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: 1408..1782

Top 3 Functional Annotations

Value Algorithm Source
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 124.0
  • Bit_score: 212
  • Evalue 2.20e-52
shikimate kinase (EC:2.7.1.71) similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 124.0
  • Bit_score: 159
  • Evalue 3.40e-37
Shikimate kinase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRI6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 124.0
  • Bit_score: 212
  • Evalue 1.60e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCAAAACAACATCATTCTGGTGGGTCTGATGGGCGCGGGAAAATCCACCATAGGTCGACAACTCGCCCGGAGACTGAACCTGACGTTCTACGATTCTGATAAGGTAATCGAAGAGCGTACTGGTGTCGGTATCCCCACCATCTTTGAAATCGAAGGTGAAGCGGGCTTCCGTGAGCGCGAGGAGCAGATCATTGCCGAATTGACCGCAATGCCCAACATTTTGTTGGCTACCGGCGGCGGCAGCGTCTTGCGTGAAACCAATCGCCAGCATATTAAAGAAGGCGGTTGCGTCATCTATTTACGTGCCAGTGCTGAGCATTTGTTTCAGCGCATCAAGCACGATCGCAGCCGCCCCTTGATGCAAACCAGTCAC
PROTEIN sequence
Length: 125
MQNNIILVGLMGAGKSTIGRQLARRLNLTFYDSDKVIEERTGVGIPTIFEIEGEAGFREREEQIIAELTAMPNILLATGGGSVLRETNRQHIKEGGCVIYLRASAEHLFQRIKHDRSRPLMQTSH