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ar4r2_scaffold_7009_5

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: 3709..4128

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 138.0
  • Bit_score: 239
  • Evalue 2.40e-60
Ribonuclease VapC n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYX6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 138.0
  • Bit_score: 239
  • Evalue 1.70e-60
PilT protein domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 136.0
  • Bit_score: 169
  • Evalue 4.80e-40

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GTGAGTATCCGCTATCTATTGGATACCAATATCCTGTCGGAATCGACGCGCCCAATTCCCAATCCAAAGGTAATGCAGCACTTACAACAAAAACGCCATCATGTGGCTACTGCCAGCGTTGTTTGGCACGAACTGATGTTTGGCTGCCAACGATTGCCACTATCCCGTAGACGTAGCCAACTTGAAACATACTTTCAAGATTTACTACTTTCTGGTTTGGTCATTTTGCCCTACACACAAGCAGCAGCAGAATGGCACGCCACAGAACGGGTTCGCTTAACAGCAATGGGACAATCACCCGCATTTGCCGATGGCATGATTGCAGCCACTGCTCATCAACATGGTCTGATTTTAGTAACCCGTAATGTGGATGATTTCAGCGGCTTTTTAGGTTTGCAGATCGAAAACTGGTTTGTGTGA
PROTEIN sequence
Length: 140
VSIRYLLDTNILSESTRPIPNPKVMQHLQQKRHHVATASVVWHELMFGCQRLPLSRRRSQLETYFQDLLLSGLVILPYTQAAAEWHATERVRLTAMGQSPAFADGMIAATAHQHGLILVTRNVDDFSGFLGLQIENWFV*