ggKbase home page

ar4r2_scaffold_318_16

Organism: ALUMROCK_MS4_Gammaproteobacteria_45_49_curated

near complete RP 49 / 55 MC: 11 BSCG 49 / 51 MC: 10 ASCG 14 / 38 MC: 3
Location: 13642..16086

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.6
  • Coverage: 768.0
  • Bit_score: 860
  • Evalue 1.30e-246
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 813.0
  • Bit_score: 856
  • Evalue 4.90e-246
  • rbh
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003737F4C similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 770.0
  • Bit_score: 865
  • Evalue 2.90e-248
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hydrogenovibrio marinus → Hydrogenovibrio → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2445
ATGTCAGAAAATCCAACTGAAACCACTCCAATTGTTCAACCTACGCCAGGTGCCGATATCGAAACGCATTTATCGCAAGATCCTGCTTTTGCGCGTGAAGCCGAAAAGTACGATAACCCCGTGCCTAGCCGTGAGTATATCTTGGCACTGCTAGAGTCTGCGGGTAAACCCATGTTTACCGATGAAATTCAGCAAGCGTTAGGCGTGGTGGATGATGAAGAACGACAAGAGGGTGTTCGTCGTCGCTTGAAAGCCATGGTGCGTGATGGTCAGTTGCTGCAAAACCGCAAAGGGGCTTTTGGGGTGGTGCAGCGTATGGACTTAATCAAAGGTCGCATTCATGCGCATCCCGATGGTTTTGGTTTTTTAGTACCCGAAGCGGGCGGTGAAGATTTGTTTTTACCTTTCCGTGAAATGCAACGCGTCATGCATGGTGACATTGTTTTAGGTCACGTCATCGATGTTGACCATCGTGGTCGCCAAATTGCTGCTATTGTTGAAGTCGTTGAGCGTGCCCATCAGCAAGTGGTGGGTAAGCTGTTTTTTGAGCATGGGCTGGCTTATGTGCGTTCTGAAAACAAACGCATTACGCAAGACGTGTTGATTCCGATTGATGCCATGCTGGGTGCGCGTGAAGGGCAATTGGTCATTGCGGAGATTATTCATCCGCCAACGCCACGTTCTAGCGCGGTCGGACACATTAAACAAATTTTGGGTGAAGTTCACGATCCTGGTTTAGAAATTGATGCCGCCATTCATGCTTATAATTTGCCCAATGAATGGTCTGAGGCTTTATTGGCAGAAGTTGCCGCTTTGCCCGATACGGTGATTGAGTCTGATTTAGAAGGACGCGAAGACATTCGTCATTTGCCATTAGTGACTATTGATGGTGATGATTCCAAAGATTTCGATGATGCCGTTTATGCCACCAAACGTCCTGATGGTAGCTGGCGCTTAATCGTCGCTATTGCCGACGTGGCGCATTATGTTAAGCCGGGTTCGGCATTGGATGAAGAAGCCATTAAGCGCGGTAATTCGGTGTATTTCCCGCAACGCGTGATTCCGATGTTGCCAGAAAAGCTATCGAATGAATTGTGTTCTTTGAATCCGCACGTAGATCGTTTGTGTATGGTGGCAGACCTGTCGCTGAATGCCGATGGCAGTGTGCGTCGTAGTCGATTCTACAATGGTGTGATGCATTCCCATGCGCGTTTGACCTACAACACCGTAGCTAAAATCGTCGTGGATAAAGATGAAGCGCTGCGCGAAAAACATAAACCGCTGGTGAAACAGTTAGACCAACTTTATGAGTTGTATCATGCTTTGCGTGCCCTGCGCGATGCGCGTGGCGCGATTGACTTTGATTCGGTTGAAACAAAAATCGTGTTCGATGAAGATCGTAAGATTGACCGCATTGAACCCGTACACCGCAACGATGCGCATAAACTGATTGAAGAATGTATGTTGTTGGCGAATGAGTCAGTCGCCAAGCATTTGTCGAAAGCTAAACTGCCGACTCTCTATCGTTTGCACGAATCACCGCCCGAAGAAAAACTGGCCGATTTACACAGGTTTTTAGCAGATTTCCGCTTGCAACTTTGTGGTGGTGGTGAAACGCCAACAGCGATGGATTACACACGTTTAATTAATTCGATTCAAGAACATCCCAATAAAGAATTGATTGAAACAGTACTCTTACGTTCAATGGCACAAGCGACCTACAGTCCGAAAGAGGGCGGTCACTTTGGTTTGGCTTATGAGCACTATTTGCACTTTACTTCACCCATTCGTCGTTACCCAGATTTAATGGTGCATCGTGGTCTGAAGCATTTAATTGCCAAAGGTAAAAAAGCCTATTGGCCTTGGACAGAGGCGGCATTGGAGCAGTTGGGTCAGCAGTGTTCAACCACTGAGCGTCGTGCCGATGAAGCCGTGCGTGATGCCACTAACTGGTTAAAATGTGAGTATTTATCGCACTTTGTTGGCGATACCTTTATGGGCGCGGTAACCTCAGTGGCGAGTTTTGGTCTATTTGTCCAACTCGATCATTTATTCGTTGAAGGCATGGTTCATGTGACTGAGCTGGGTAATGAGTATTTCCATTATGATGCTTCTAAACACATTATGATGGGCGAGCGTACCGGTAAAGCTTACCGCTTGGGTGATCGTATTGCGGTACAAGTCGCTAAAGTTAACTTAGACGAGCGTAAAGTAGACTTTTCGTTACCAGGTGTTGAAAAAGCACCTGAAAGAGTCATGCAAGATCGTGGTGCGAAAAAGCGTCGTCCAGCGCCGAAACCAGCAGCACAAATGGAAGTACAGGTCGATTCCATGCAAATGATCAAAGATATTTTGCAGGAAGGTGTCACAGCCGAGGTTGCAAGTGACGAGAAGCCGAAGAAGAAACGCCGTCGTTACGTCAAAAAACGTCGTAAAGACGCCTAA
PROTEIN sequence
Length: 815
MSENPTETTPIVQPTPGADIETHLSQDPAFAREAEKYDNPVPSREYILALLESAGKPMFTDEIQQALGVVDDEERQEGVRRRLKAMVRDGQLLQNRKGAFGVVQRMDLIKGRIHAHPDGFGFLVPEAGGEDLFLPFREMQRVMHGDIVLGHVIDVDHRGRQIAAIVEVVERAHQQVVGKLFFEHGLAYVRSENKRITQDVLIPIDAMLGAREGQLVIAEIIHPPTPRSSAVGHIKQILGEVHDPGLEIDAAIHAYNLPNEWSEALLAEVAALPDTVIESDLEGREDIRHLPLVTIDGDDSKDFDDAVYATKRPDGSWRLIVAIADVAHYVKPGSALDEEAIKRGNSVYFPQRVIPMLPEKLSNELCSLNPHVDRLCMVADLSLNADGSVRRSRFYNGVMHSHARLTYNTVAKIVVDKDEALREKHKPLVKQLDQLYELYHALRALRDARGAIDFDSVETKIVFDEDRKIDRIEPVHRNDAHKLIEECMLLANESVAKHLSKAKLPTLYRLHESPPEEKLADLHRFLADFRLQLCGGGETPTAMDYTRLINSIQEHPNKELIETVLLRSMAQATYSPKEGGHFGLAYEHYLHFTSPIRRYPDLMVHRGLKHLIAKGKKAYWPWTEAALEQLGQQCSTTERRADEAVRDATNWLKCEYLSHFVGDTFMGAVTSVASFGLFVQLDHLFVEGMVHVTELGNEYFHYDASKHIMMGERTGKAYRLGDRIAVQVAKVNLDERKVDFSLPGVEKAPERVMQDRGAKKRRPAPKPAAQMEVQVDSMQMIKDILQEGVTAEVASDEKPKKKRRRYVKKRRKDA*