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ar4r2_scaffold_12273_7

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60_curated

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(4428..5054)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VP11_ALCBS similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 186.0
  • Bit_score: 221
  • Evalue 5.60e-55
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 186.0
  • Bit_score: 222
  • Evalue 4.60e-55
algU; RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 186.0
  • Bit_score: 221
  • Evalue 1.60e-55

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Taxonomy

Alcanivorax sp. 19-m-6 → Alcanivorax → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGTCAGTCCGCCCCAAGGGTCAAGCAACGGAACGAATACTAAACCCGAGGTTGGATGCCAGTGCCAGCGATTTGCAGTTGGTGGAGTTTGCCAAATCCGGCGATAGCTATGCGTTTGAGTTATTGCTGCGCAAGTATCAGCACAAGGTGACCAAATTGATTATGCGGTATGTGCGCGATATGGACGAAGCGCTGGATTTAACTCAAGAGACGTTTATTAAAGCATGGAAAGCCTTGCCTGCCTTTCGTGGTGAGGCGGCGTTTTACACATGGCTCTACCGCATTGCAGTGAATACGGCGAAAAATTATTTGTCCACGGCGCATCATCAAGCGCGCATGGTGGACTTGGATGCCGACGAAACCGATCAATATGCCGACACACCCGGACTCGTCACCCGTGATACGCCGGAAAGCGTATTGAGTGGTACGCAATTGCACGGTGTGCTGAAAAACGCTTTGAGTGAATTGCCGGAGGATCTGCGCTCGGCGATCACCTTGCGCGAGTTTGAAGGTTTGACTTATGAAGAAATTGCCGAGGTCATGGATTGCCCGATTGGTACGGTGCGTTCGCGCATTTTCCGTGCGCGCGAGGCCATTGATAAACATTTACAGGCCTTTATGGGTTAG
PROTEIN sequence
Length: 209
MSVRPKGQATERILNPRLDASASDLQLVEFAKSGDSYAFELLLRKYQHKVTKLIMRYVRDMDEALDLTQETFIKAWKALPAFRGEAAFYTWLYRIAVNTAKNYLSTAHHQARMVDLDADETDQYADTPGLVTRDTPESVLSGTQLHGVLKNALSELPEDLRSAITLREFEGLTYEEIAEVMDCPIGTVRSRIFRAREAIDKHLQAFMG*