ggKbase home page

ar4r2_scaffold_14534_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60_curated

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 2..439

Top 3 Functional Annotations

Value Algorithm Source
TPR repeat-containing pilus assembly protein PilF; K02656 type IV pilus assembly protein PilF id=12498001 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 138.0
  • Bit_score: 111
  • Evalue 4.30e-22
TPR repeat protein {ECO:0000313|EMBL:BAH89628.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 142.0
  • Bit_score: 111
  • Evalue 6.10e-22
type IV pilus biogenesis/stability protein PilW similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 137.0
  • Bit_score: 110
  • Evalue 2.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 438
CAAAACAACTACGGCGCGTTTATGTGCCGCCAAGGACAATACGCCGAAGGCATTACCATGCTGCAAGGCGCACTCAGCAATCCTCTGTATCGCACCCCCGGCTTTGCTTGGGCCAACATTGGACAATGCCAGCGCCAAAATGGGCAACTTACCGAAGCCGACACCTCGCTGCGTCAAGCCTTGCGTATCGACCCACGCCAGGCCTATGCGTGGCTGCAACTCGCTTCCTTGCAACTTGAGCAAAACAAACCCGTGGATGCCAATGTGAGCTTGCAACGCTACCACGCACTCGAAGCACAAAATCCAGCCAGCTTGCTGCTGGGTGCCAAAATCGAAAAAGCACTCGGGCATCGTGAGGCACAAGCCCATTACGAACTGCTTTTGCGCGGAAAATTCCCCGATTCGGACGAAGCACTAAGTCTTGGAGGCTCGCGGTGA
PROTEIN sequence
Length: 146
QNNYGAFMCRQGQYAEGITMLQGALSNPLYRTPGFAWANIGQCQRQNGQLTEADTSLRQALRIDPRQAYAWLQLASLQLEQNKPVDANVSLQRYHALEAQNPASLLLGAKIEKALGHREAQAHYELLLRGKFPDSDEALSLGGSR*