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ar4r2_scaffold_9865_2

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60_curated

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 208..459

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNR6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 81.0
  • Bit_score: 79
  • Evalue 1.40e-12
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EIJ33009.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 81.0
  • Bit_score: 79
  • Evalue 1.90e-12
RNA polymerase sigma factor SigK similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 79.0
  • Bit_score: 67
  • Evalue 1.50e-09

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCAGGATGTGGGCAAATGGTTGGTCATGAGCGGACAAGGCAACACCGAGGCATTCCGCCAATTGTACCAGCGGACTTCACCGCAATTATACCGGGTTTGTTTACAGTTACTGGATGACCCCGCCAAGGCCGAAAAGGTGCTGGAGAGAGGGTTTGTGCAGATATGGCAGCGTTCCAACCGCTACGACCCGCGCAAGGATGATGCCCTACCGTGGATGTTGCGTACCCTCCAGCGGGCGGCTCGGCTATAA
PROTEIN sequence
Length: 84
MQDVGKWLVMSGQGNTEAFRQLYQRTSPQLYRVCLQLLDDPAKAEKVLERGFVQIWQRSNRYDPRKDDALPWMLRTLQRAARL*