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ar4r2_scaffold_35560_1

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60_curated

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(2..814)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ4_HALNC similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 285.0
  • Bit_score: 254
  • Evalue 7.70e-65
RNA polymerase sigma-70 subunit RpoD similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 285.0
  • Bit_score: 254
  • Evalue 2.20e-65
Tax=BJP_IG2102_Gammaproteobacteria_62_140 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 287.0
  • Bit_score: 273
  • Evalue 3.00e-70

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Taxonomy

BJP_IG2102_Gammaproteobacteria_62_140 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 813
ATGTCTGACGATCCCAAGTCCAGCATTAAAGACCTTATCGCTCGCGGCAAAGAGCAGGGCTACCTGACCTACGCCGAGATTAACGACACCCTGCCCGAGGGCATGGTCGAAGCCGATCAGATGGAAGACATCATCGGCATGATTAACGACATGGGCATTCGCGTGTTTGAAACCGCGCCCGATGCCGATGAGCTCACCCTCTCGGATAACGCTCCCGCCCCGGACGAAGATGCCGCCGAAGAGGCTGCAGCTGCACTCACCTCAACCGTGGATGATGTCGTTGGCCGCACCACCGACCCGGTACGCATGTACATGCGCGAAATGGGCACGGTGGACTTGCTGACCCGTGAAGGCGAAATTGTCATTGCCAAGCGCATTGAAGCCGGCTTGCGTGAAATGCTCTGCGCACTCGCCATGCACCCGCCCGCCATCACCGAACTGCTGAGTGACTTTGACCGCTTTGAGGCCGGTGAAGCACGCATTGTGGACATTGTCGTCGGCTTCGCCCCGCCGGAAGAAGAAGTTCCCGTCGAAGTGATTGTCGCCAGCGAAGAAACCGAGCCAGATGAAACCATCGAAGATGTCGTCGATGAAGCTGAAGAAGAAGTCGATGCCGAACCTGCGGGCTTGGACATCGAAGCCGTTCGCATCCACATGGAAGCCATGCGCGAACTGCACACCCGCAGACTCGCCGGTGAAAACGTCAAGGATGAGCTTGAAGCCAGCCTGCTCGGCCTCAAACTCAACCCACTCTTAACCGAACGCCTCGTCAAAAACCTGCGCGGTGCTGTCGAGCGCGTGCGCAAACTTGAG
PROTEIN sequence
Length: 271
MSDDPKSSIKDLIARGKEQGYLTYAEINDTLPEGMVEADQMEDIIGMINDMGIRVFETAPDADELTLSDNAPAPDEDAAEEAAAALTSTVDDVVGRTTDPVRMYMREMGTVDLLTREGEIVIAKRIEAGLREMLCALAMHPPAITELLSDFDRFEAGEARIVDIVVGFAPPEEEVPVEVIVASEETEPDETIEDVVDEAEEEVDAEPAGLDIEAVRIHMEAMRELHTRRLAGENVKDELEASLLGLKLNPLLTERLVKNLRGAVERVRKLE