ggKbase home page

ar4r2_scaffold_20341_3

Organism: ALUMROCK_MS4_Gammaproteobacteria_54_60_curated

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(1362..2012)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 217.0
  • Bit_score: 303
  • Evalue 4.30e-80
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 217.0
  • Bit_score: 303
  • Evalue 2.10e-79
diaminopimelate epimerase n=1 Tax=Lamprocystis purpurea RepID=UPI00037C6BFB similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 216.0
  • Bit_score: 298
  • Evalue 3.70e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
CGCTATCGGATTTTTAACGCGGATGGAAGTGAGGTTGAACAATGTGGCAACGGCGCACGCTGTTTCGCCCGTTTCGTGCGCGATGAAGGCTTAACCGACTCCAATCACATCCCCGTCGAAACGGCTTCGGGCGTGATTGTGCTGCATATCGAAGATAATGGTCAGGTGCGTGTCAATATGGGCGAGCCGCGCCTTGAACCCAAGGACATCCCTTTCACAGCGACGGAACGCTGCCTAGATTATTCACTCGATATCAATGGAACAGCGTATGACATCTGTGCGGTTTCCATGGGCAACCCACACGCCGTCTTGCGTGTTGATGATGTTGACTGTGCGCCAGTTAACGAATTAGGCGCATCGATCGAAAATCATCCTCGCTTCCCCAAGCGCAGCAATGTTGGCTTTATGCAGGTTTTAGGCAATGACCACATTCGTCTGCGCGTATTTGAGCGCGGAGCGGGCGAAACACTGGCCTGCGGCACGGGTGCTTGTGCAGCGGTGGTGGCCGGAAGGCTGCACGGCTGGCTTGGTGATCGCGTGCGTGTTGATTTACCAGGAGGCTCACTGCACATTCAATGGTCGGGAGAAGGCCACCCCGTCATGATGACTGGCCCCGCAAGCCGAGTATTTAGTGGACACATCGACCTATGA
PROTEIN sequence
Length: 217
RYRIFNADGSEVEQCGNGARCFARFVRDEGLTDSNHIPVETASGVIVLHIEDNGQVRVNMGEPRLEPKDIPFTATERCLDYSLDINGTAYDICAVSMGNPHAVLRVDDVDCAPVNELGASIENHPRFPKRSNVGFMQVLGNDHIRLRVFERGAGETLACGTGACAAVVAGRLHGWLGDRVRVDLPGGSLHIQWSGEGHPVMMTGPASRVFSGHIDL*