ggKbase home page

ar4r2_scaffold_8238_2

Organism: ALUMROCK_MS4_Gammaproteobacteria_57_14_Partial_curated

partial RP 41 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(560..2902)

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YAP6_THIV6 similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 572.0
  • Bit_score: 625
  • Evalue 3.70e-176
  • rbh
PAS S-box/diguanylate cyclase domain-containing protein {ECO:0000313|EMBL:KHF26055.1}; TaxID=2340 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="Solemya velum gill symbiont.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 668.0
  • Bit_score: 641
  • Evalue 1.20e-180
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 572.0
  • Bit_score: 625
  • Evalue 1.00e-176
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Solemya velum gill symbiont → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2343
ATGCCATATTCCGCCCACCTGTCACACGCCTTGCAGCGAGTCAGCCGGATTGCCTGGCTGGCAGTGTTCGCCTGGACGGCGGTGCTGGGGGCTTCGTTGCTGTGGAACACTCACAACGAACACACGCACATGCTCAACACGGTGCGTAAAATCGCGCAAAACGACCTCGACAACAAGCTGGCGTTTCAACGCTGGCTGCAACGGTTCGGCCAGGCCAAGCGAGTCGAGGAGTGTTTTCAGGCGATTGACGCCTTCATGGCGGAAAACGCCGGCAACCACGAAACCCGGAGCAAGCTGCTGACCCAGCCGGCGCTGAACAGCCAACGCGCGGACGCTTGGGAGCAACGGGTGTTGGATGAGTTGCTGACACTCGGCGCGCAGGAAGTCTATGAAGTGGTGGAGAACGACGGTCAGCCGCTCATGCGCCTGATGAAACCGGTGCCGGTGTCGCGGGTCTGCATTACCGAGGCGGACGACCAGAAAACCAGCTTCGACATGGCGATCAGCGTTGCCCTGCCGTTGCACACCGACTATGCCTATCTGTCCCAGGCGGTTTCGCGCATTGCCCTGAGCCACGGCGTGATAGGCTTATTCGGCCTGGCAGTGATCGGGTTTGTCAGCCGCCGCGCCCGGCAACGCCTGCATGAACGCGCCCAATCCGAGGAGAAATTGCGCCAGGCTGCCACGGTTTTCGAGAGCACCAGCGAAGGAGTCGTGGTGACTGATGCTGAGGCCAATATCATCACGGTCAACCCGGCTTTTGTTGCTATCACCGGCTACCGCGAGGACGAGGTGATGGGCCGCAATCCCCGGATGCTCCAATCAGGCCGCCATGATCAGGCGTTTTTCCAAAGCTTGTGGGCCTCGGTCAAAAAAACCGGCAnnnnnnnnnnCGAAGTCTGGAACCGCCGCAAAAACGGCGAGGTCTACCCGGAATGGCTGAACATCAGCGTGGTGCGCGATATCAGCGGTAAGCTAACGCACTATATCGGGGTGTTTTCCGACATCAGCGCGATCAAAGAATCCGAGCAGCAACTGAATTTTCTGGCGCACCACGATCCGCTTACCAGCCTGCCTAACCGCCTGTTGTTCGGCGCGCGCCTGGAACATTCGATCCAGCAGGCGCACCGGCGGCATAGCGAGTTGGCGGTGCTGTTCATTGATCTGGATCGCTTCAAGAACGTCAACGATACCCTGGGCCACGCCTGCGGCGACGATTTGCTCAGGCAGGTGGCCGACCGGCTGGGCGCGTTGCTGCGCGAGGAAGACACTCTGGCGCGGCTGGGCGGCGACGAGTTCGTGATTATCGTCGAGGCACTCAACGCGGCCCGCGATTCGGCCAAGGTGGCGGACAAGTTGCTGGCGGCCCTGCACAACCCGTTTCAGCTTCTGGGACACGAAGTGTTTATCGGCGCGAGTATCGGCATCAGCGTGTATCCGGCGGACGGCGAGGATTGCGAAACCCTGATCAAGCACGCCGACATCGCTATGTACCGGGCCAAGCACCAGGGCCGCAACAACTATCAGTTCTACACCCAAGAACTGACCGCCAGCATGTTCCAGCGTTTCACCCTGGAACACGGCCTGCGCCGCGCGCTGGAACGTAAGGAAATGATCTTGTACTACCAGCCGCAACTGGATATGGCGCATGGCCGCATCACCGGGGTGGAGGCGCTGATTCGCTGGCAGCACCCGGAACGGGGGTTACTGTTGCCGGGCAATTTTATTCCCTTGGCCGACGAAATGGGGGTACTCACCCATATCGGCGAATGGGTCTTGCACGCCGCCTGCCGCCAGGCCCAGCAATGGCGGGAACAGGGCTTGCCGCCGTTGCGTATGGCCGTCAATGTGTCAGCCTATCAGATCACCCACAGCGACATCGTGAAAACCGTGCGCGAGGCCATCAAAGATACCGGCTTCGATCCGGATTGCCTGGAAGTGGAAATCACCGAGGATTTCTTCATGCACGGCGACGACGAAACCCTGGGCGTGTTGCATGAACTCAAAGCGATGGGCATTACCCTGGCAATAGACGACTTCGGCACCGGCTATTCTTCGCTCAGTTATCTCAAGCGTTTTCCGATAGACCGGATCAAAATCGATCAGTCGTTCATCCGCGACATTCCGCGCGACAGCGACGACGAAGCGATTGCCCGCGCGATCATCGCCATCGGCCATACCCTGAAGCTCACGGTGATTGCCGAGGGCGTGGAGAACAACGCCCAGCACGATTTTCTGCTGCTGGAGAAATGCGACGAAATGCAGGGATTTTTATACAGCCCGCCGCTGCCTGCCGAGGAGTTGGAAAAGCTCTTGCGAGCGCAGATGGAGTGCCAGGGATAA
PROTEIN sequence
Length: 781
MPYSAHLSHALQRVSRIAWLAVFAWTAVLGASLLWNTHNEHTHMLNTVRKIAQNDLDNKLAFQRWLQRFGQAKRVEECFQAIDAFMAENAGNHETRSKLLTQPALNSQRADAWEQRVLDELLTLGAQEVYEVVENDGQPLMRLMKPVPVSRVCITEADDQKTSFDMAISVALPLHTDYAYLSQAVSRIALSHGVIGLFGLAVIGFVSRRARQRLHERAQSEEKLRQAATVFESTSEGVVVTDAEANIITVNPAFVAITGYREDEVMGRNPRMLQSGRHDQAFFQSLWASVKKTGXXXXEVWNRRKNGEVYPEWLNISVVRDISGKLTHYIGVFSDISAIKESEQQLNFLAHHDPLTSLPNRLLFGARLEHSIQQAHRRHSELAVLFIDLDRFKNVNDTLGHACGDDLLRQVADRLGALLREEDTLARLGGDEFVIIVEALNAARDSAKVADKLLAALHNPFQLLGHEVFIGASIGISVYPADGEDCETLIKHADIAMYRAKHQGRNNYQFYTQELTASMFQRFTLEHGLRRALERKEMILYYQPQLDMAHGRITGVEALIRWQHPERGLLLPGNFIPLADEMGVLTHIGEWVLHAACRQAQQWREQGLPPLRMAVNVSAYQITHSDIVKTVREAIKDTGFDPDCLEVEITEDFFMHGDDETLGVLHELKAMGITLAIDDFGTGYSSLSYLKRFPIDRIKIDQSFIRDIPRDSDDEAIARAIIAIGHTLKLTVIAEGVENNAQHDFLLLEKCDEMQGFLYSPPLPAEELEKLLRAQMECQG*