ggKbase home page

ar4r2_scaffold_1980_15

Organism: ALUMROCK_MS4_Sulfurovum-related_34_372_curated

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(13702..14424)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1539064 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.8
  • Coverage: 240.0
  • Bit_score: 296
  • Evalue 2.90e-77
truA; tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 240.0
  • Bit_score: 264
  • Evalue 2.50e-68
tRNA pseudouridine synthase A n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6QBC9_SULNB similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 240.0
  • Bit_score: 264
  • Evalue 8.70e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfurovum sp. FS06-10 → Sulfurovum → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGCGAATCAAAGCAACCATATCCTACGATGGTGGGCGTTTTAGTGGATTTCAACGCCAAAACTCGACACCAAATACTATCATAGGGCATTTAGAAGAGGCGTTAAAAAGTCTAAATATCAAAACTCAGATACGAGGAAGTGGGAGAACAGATGCTGGGGTTCATGCAACAGCTCAAGTGATTGATTTTGAAGTTCCCTCATTTTGGGAAGATTTACAAAAGCTTAAAGAGGAGTTGAACATTCGACTTAAAGGGATTAGAGTGCGAAAGATTGCTCAAGTTGAAGAGGGGTTTCACTCACGATTTTGGGCAAAAAAACGACAATATCGATATATTTTCAAAACCAGCCCTATAAATCCATTTGAAGAGAATTATATCTCTTATTATCCCCCATTTGATGCGGATATCTTAAAAAAAGCACTTAAACTTTTTGAAGGAGAGCATGATTTTAGTTACTTTTGCAAAAGTGGTTCGCTCACACACACCAATGTCCGAAAAATCTACAACGCTAAATATAAAAAATACAAAAATTATCATATTATCACTTTTGAGGCAAATGGTTTTTTGCGTTCTCAAGTGCGTATGATGGTTGAAAGTTCCATGAAATGTAGTTTAAATAAAATATCTATTAAGAATTTGGAAGCTCAAATTCAGCTCAAGTCTCGTTTTAGTTCTCATTTAGCCCAACCTTACGGACTTTACTTAACTAATGTAAAATACTGA
PROTEIN sequence
Length: 241
MRIKATISYDGGRFSGFQRQNSTPNTIIGHLEEALKSLNIKTQIRGSGRTDAGVHATAQVIDFEVPSFWEDLQKLKEELNIRLKGIRVRKIAQVEEGFHSRFWAKKRQYRYIFKTSPINPFEENYISYYPPFDADILKKALKLFEGEHDFSYFCKSGSLTHTNVRKIYNAKYKKYKNYHIITFEANGFLRSQVRMMVESSMKCSLNKISIKNLEAQIQLKSRFSSHLAQPYGLYLTNVKY*