ggKbase home page
Advanced Search
Search Help

ar4r2_scaffold_548_5

Organism: ALUMROCK_MS4_Sulfurovum-related_34_372_curated

near complete RP 50 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(8016..12170)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:KIM05268.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1539062 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. AS07-7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 1384.0
  • Bit_score: 2587
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.0
  • Coverage: 1385.0
  • Bit_score: 2167
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=RPOB_SULNB similarity UNIREF
DB: UNIREF100
  • Identity: 77.0
  • Coverage: 1385.0
  • Bit_score: 2167
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfurovum sp. AS07-7 → Sulfurovum → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4155
ATGTTAAATTCTTTGCATTCTGGGAATAGACTAAGAGTTGATTTCTCGAAAACTCCACGACAAATAGAAGTTCCTAACCTATTACAACTCCAACAACAATCTTACGATGACTTTTTAATGATTGATTCTGACGATAGAGCAAATTCTACGATAGAGCGAGTTTTGCGTTCAGTGTTTCCTATGCACGACGCTCAAAATAGATTATCTTTGGAGTATCGAGGAAGTCAAGTTATTCAACCACGATATACGATTAGAGAGTGTATAGAAAGAGGACTTACCTATTCTGTCTCTCTTAAAATGGATATTTCTTTAATTATTTGGAATAGAGATGAAAAAAGTGGTGAAAAACTTGAAGTAAAAGAGATAAAAGAGCAGTCTATCTTTGTTAGAGATATCCCTTTAATGACCGATAGAACATCATTTATCATCAATGGTATAGAAAGAGTTGTGGTAAATCAACTCCACCGCTCACCAGGTGTTATTTTTAAAGAAGAAGAGGCAAATTTAGTCGAAAATAAACTTGTATATTCAGGACAAATTATTCCAGATAGAGGTTCATGGCTCTATTTTGAGTATGATTCTAAAGATATTTTGTATGCAAGAATCAATAAAAGAAGAAAAATCCCTGTAACCATTCTTTTAAGAGCATTGGGCTACTCAAAAGATGATATCGTTAAACTTTTTTATACTCCTAAAGAAATTTTTGTAAGAGACAATAGATTTGTAACCAAATTTAATGTCGATGATTTTTCCAGAAGAGCTCCGTATGAGGTAAAAGATCTCAATGGAAATGTCATTATTGCTGCTGCAAAAAGATTGAATAAGAAAAAAGCACAAGCTTTAGTAGAAGAGGGACTTGAGTGGATAGAGTATCCATTGGATGTTTTGATGGATAGACACTTGGCTTCTTCAGTCATCGACCCTTTAACGGGTGAAGTGATTTATGATACTATTACTCCACTTGATGAGATTAAACTTAAAAAAATTATTGATGCTGATATTGAAAGTTTCTTTATTGCTGATGATTTATTAGAAGAGAGTGATGTTTCTATTATTCGTTCATTTATGGCTGAACAAGAGTCGTTAAGACTTTTAAAGCAAACTGAAGATATCACAGACGAAAATGCTTTAGCAATTATCCGTATTTATAAGGTAATGAGACCAGGTGAGCCTGTAACCAAAGAGGCGGCGACTGAATTTTTAAAACAACTATTCTTTGATCCTGAAAGATACGACCTAACCAAAGTTGGTAGAATGAAAATGAACCACAAATTGGGCGTTGATGTTCCAGAATATGTAACAGTTTTGACACCTGAAGATATTATTCAAACGATTAAATATTTGGGTAAAGTTAAGAATGGTTCAGGTCATATCGATGATAGAGACCACTTAGGAAACAGAAGAATTCGTTCAATTGGTGAGTTGTTAGGAAATGAACTTTATAGCGGTTTGACAAAAATGCAAAAAGCAATTAAAGACAAGATGACAACACTTTCAGGTTCTCTTGATGAGCTTAAACCACACGATTTGATTAACTCTAAAATGATTACAAACACTATTTTAGAGTTTTTTGCAAGTGGTCAGCTTTCTCAATTTATGGATCAAACCAATCCACTTTCAGAAGTTACACACAAAAGAAGACTCTCCGCACTTGGAGAGGGTGGACTTGTTAAAGAGAGAGCTGGTTTTGAAGTTAGAGATGTTCACCCAACACATTATGGAAGAATCTGTCCAATAGAGACTCCAGAGGGTCAAAATATTGGTCTTATCAATACTTTAGCGACTTATGCAAAAGTCAATGAGTTAGGATTTATCGAGTCTCCTTACAATAAAGTGGTCAATGGGAAAGTAAGTTCAGAGATTGTTTATATCACTGCAACTCAAGAAGAAGATATGGTTATCGCTCCTGCATCTACTAAGATAGATGAAGAGGGTAACATTATTGAAGAGCTTATTGAAGTAAGATGTAATGGTGAAATTTATCTAAGTGAACGAGTAAAAGTTCATCTTATCGATATCTCTCCTTTGATGGTTTCAGGTTCAGCCGCTGCGTTGATTCCATTTTTAGAACACGATGATGCAAATAGAGCTTTGATGGGTTCAAACATGCAACGACAAGCTGTTCCTCTTTTACAAAGTGAAGCTCCAATGGTTGGAACAGGAATGGAAGCAATTATTTGTAGAGATGCTTGGGAATGTGTTAAAGCAAAACGAGCAGGTGTTGTAGAAAAAGTTGATTCAAAAAATATTTATATTTTAGGAGAAGATGAGAGCGGTGTATTTATCGACCATTATGGACTTGAAAAAAATATACGAACCAACCAAAGCACAACTTTTACCCAAAAACCAACCGTTCAAGTTGGCGATAAAGTTGTTGCTGGAGAGCCTATTGCAGATGGTCCATCAATGGAAAATGGAGAGTTAGCAATTGGAAAAAATGTTTTAGTTGCTTTCATGCCATGGTATGGATACAACTACGAAGATGCGATTATCTTATCTGAAAAGATTATAAAAGAGGATACTTTTACTTCCATCCACATCTATGAAAAAGAGGCAGAAGCTAGAGAGCTTAAACATGGAACAGAAGAGATTACACGAGACATTCAAAACATTCGAGAAGATGAATTAAGTCATCTAGATGAGAGTGGTATTGTCAAAATTGGTACTTATGTTAAACCTGGAATGATTTTGGTAGGTAAAGTTTCTCCAAAAGGAGAGATTAAACCAACACCAGAAGAGAGACTATTGAGAGCAATTTTTGGTGAAAAAGCTGGACATGTTGTCAATAAATCTCTTTATTGTCCAAGTTCTGTCGAGGGTGTTGTTGTTGATGTTAAAGTTTTCAATAAAAAAGGTTCAGACAAAGATGATAGAGCAAAACTTTCATATGAGACTGAAAAATCGATTTTAGATAGAGAACATCATGACAAGTTGCTTATGATAGATAAAGAAGAGATTTTAAAAATTGTTGCTCTTTTATCTAAAGACAAACTCGAAAAAGATGTCAATATTGAGGGTAAATTGTATGAAGCTGGAGAGAGTATAGGCGAAGAAATATTGAAAAATATCAATCGATTTGTTCTTAGAAATGTTGTTCAATCATACAGCAATAAAACTCAATCAGACTATAACAACATGAAAAACTACTTCCAAAGAGAGAAGAAAAAACTCAAAGATGCACATGAGGAGAAGCTAGAAATCTTAGAAAAAGATGATATCTTACCAAGTGGTATCTCCAAAAGAGTTAAAGTTTATATCGCAACAAAAAGAAAAATTAAAGTTGGGGATAAAATGGCTGGACGACACGGAAATAAAGGTATCGTTTCAAATATTGTTCCTCAAATTGATATGCCATACATGGAAAATGGAGAGAGTGTAGATATCATCCTCAATCCGCTAGGTGTTCCTTCTCGTATGAATATTGGTCAGGTTTTGGAAGTTCACTTAGGTTTAGCTGGTAAACGATTGGGTACTCAAATTGAAGCAATCTTCAAGCAACATCAAGAGACCATGGTAAGCGAGTTAAGAGCTAAGATGATGAGTATCGCCCATGTTGCTAAATTGATGGAGATTCAAAATGAGTTAAGTGCGATGAGTGATGAAGAGCTTATCAAACAAGCTAGAGATTGGGCAAAAGGGGTTAAGTTTGCAACACCAGTGTTTGAAGGGGTAAACAAAGCTGAATTTGCTCAATTGTTTGAACTTGCAAAGCTTGATGCTGATCTAAAATCAACGCTTTACGATGGTAAGACGGGCGAAAAAATGCTTGAGAGAGTCAATGTTGGGTATATGTATATGTTGAAACTTCACCACCTTGTTGATGAGAAAGTTCACGCAAGAAGCACAGGTCCATATTCACTTGTTACGCAACAACCTGTTGGGGGTAAAGCACTATTTGGTGGACAAAGATTTGGAGAGATGGAAGTTTGGGCATTGGAAGCCTATGGTGCATCACATGTACTTAAAGAGATGCTAACCATCAAATCAGATGATGTAGATGGAAGAAACAGAGCTTATAGAGCAATTACAAGAGGCGAAAGTGTTCCTAGTTCTGGTATTCCAGAGACTATGTTCGTTTTAACAAAAGAGCTTCAAGCATTGGGTCTTGATGTTGATTTGTATGAAAATAAAAAAGAGGAAAGCACTAATGAGTAA
PROTEIN sequence
Length: 1385
MLNSLHSGNRLRVDFSKTPRQIEVPNLLQLQQQSYDDFLMIDSDDRANSTIERVLRSVFPMHDAQNRLSLEYRGSQVIQPRYTIRECIERGLTYSVSLKMDISLIIWNRDEKSGEKLEVKEIKEQSIFVRDIPLMTDRTSFIINGIERVVVNQLHRSPGVIFKEEEANLVENKLVYSGQIIPDRGSWLYFEYDSKDILYARINKRRKIPVTILLRALGYSKDDIVKLFYTPKEIFVRDNRFVTKFNVDDFSRRAPYEVKDLNGNVIIAAAKRLNKKKAQALVEEGLEWIEYPLDVLMDRHLASSVIDPLTGEVIYDTITPLDEIKLKKIIDADIESFFIADDLLEESDVSIIRSFMAEQESLRLLKQTEDITDENALAIIRIYKVMRPGEPVTKEAATEFLKQLFFDPERYDLTKVGRMKMNHKLGVDVPEYVTVLTPEDIIQTIKYLGKVKNGSGHIDDRDHLGNRRIRSIGELLGNELYSGLTKMQKAIKDKMTTLSGSLDELKPHDLINSKMITNTILEFFASGQLSQFMDQTNPLSEVTHKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPIETPEGQNIGLINTLATYAKVNELGFIESPYNKVVNGKVSSEIVYITATQEEDMVIAPASTKIDEEGNIIEELIEVRCNGEIYLSERVKVHLIDISPLMVSGSAAALIPFLEHDDANRALMGSNMQRQAVPLLQSEAPMVGTGMEAIICRDAWECVKAKRAGVVEKVDSKNIYILGEDESGVFIDHYGLEKNIRTNQSTTFTQKPTVQVGDKVVAGEPIADGPSMENGELAIGKNVLVAFMPWYGYNYEDAIILSEKIIKEDTFTSIHIYEKEAEARELKHGTEEITRDIQNIREDELSHLDESGIVKIGTYVKPGMILVGKVSPKGEIKPTPEERLLRAIFGEKAGHVVNKSLYCPSSVEGVVVDVKVFNKKGSDKDDRAKLSYETEKSILDREHHDKLLMIDKEEILKIVALLSKDKLEKDVNIEGKLYEAGESIGEEILKNINRFVLRNVVQSYSNKTQSDYNNMKNYFQREKKKLKDAHEEKLEILEKDDILPSGISKRVKVYIATKRKIKVGDKMAGRHGNKGIVSNIVPQIDMPYMENGESVDIILNPLGVPSRMNIGQVLEVHLGLAGKRLGTQIEAIFKQHQETMVSELRAKMMSIAHVAKLMEIQNELSAMSDEELIKQARDWAKGVKFATPVFEGVNKAEFAQLFELAKLDADLKSTLYDGKTGEKMLERVNVGYMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGASHVLKEMLTIKSDDVDGRNRAYRAITRGESVPSSGIPETMFVLTKELQALGLDVDLYENKKEESTNE*