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ar4r2_scaffold_22355_3

Organism: ALUMROCK_MS4_Thiomonas_64_15_curated

partial RP 38 / 55 MC: 2 BSCG 40 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(1385..1774)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 129.0
  • Bit_score: 235
  • Evalue 8.60e-60
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 129.0
  • Bit_score: 235
  • Evalue 4.20e-59
DNA-directed RNA polymerase subunit alpha n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X634_THIK1 similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 129.0
  • Bit_score: 235
  • Evalue 3.00e-59

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Taxonomy

Thiomonas intermedia → Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GAAATCGAGACCAACGGTGTCGTCAGTGCCGAGGAGGCCATTCGTTCTTCTGCCCGTATTCTGGTTGAGCAACTCTCTGTGTTCGCCAACCTGGAGGGTGCGGAAACCACTGAGGCCGCGGAAGCCGCCGCGGGTGCGCAAACTTACGACCCGATCCTGTTGCGCCCGGTGGACGAACTTGAACTGACTGTGCGCTCTGCCAACTGCCTCAAGGCGGAGAACATTTATTACATCGGCGACCTCATTCAACGCAGCGAGACCGAGTTGCTCAAGACCCCCAATCTGGGCCGCAAGTCACTGAACGAAATCAAGGAAGTGCTCGCTGCGCGTGGGTTGACCTTGnnnnnnnnnnnnGAAAACTGGCCGCCTAGTGGCTTGGACAAGCGCTGA
PROTEIN sequence
Length: 130
EIETNGVVSAEEAIRSSARILVEQLSVFANLEGAETTEAAEAAAGAQTYDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRSETELLKTPNLGRKSLNEIKEVLAARGLTLXXXXENWPPSGLDKR*