ggKbase | organisms

Consensus taxonomy: Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: ALUMROCK_MS4_Thiomonas_64_15 Manually curated genome
Original version: ALUMROCK_MS4_Thiomonas_64_15

Properties

Avg. coverage: 1.00 Longest contig: 23.85 Kbp Bin length: 2.69 Mbp GC content: 61.79 %

Contigs count: 872 Features count: 3312 rRNAs count: 0 tRNAs count: 23

Genome completeness

partial RP 38 / 55 MC: 2 BSCG 40 / 51 MC: 2 ASCG 9 / 38 MC: 2

Displaying items 651-700 of 872 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
ar4r2_scaffold_20350 Species: Thiomonas intermedia (50%)	2	1595 bp	59.50	1.00	91.97
ar4r2_scaffold_8528 Species: Thiomonas intermedia (50%)	2	3077 bp	62.43	1.00	95.94
ar4r2_scaffold_16898 Species: Thiomonas sp. CB2 (50%)	2	1736 bp	58.01	1.00	52.36
ar4r2_scaffold_30232 Species: Thiomonas sp. CB2 (100%)	2	1139 bp	61.11	1.00	99.03
ar4r2_scaffold_26936 Species: Thiomonas intermedia (50%)	2	1210 bp	67.11	1.00	91.49
ar4r2_scaffold_23935 Species: Thiomonas intermedia (100%)	2	1317 bp	59.61	1.00	88.38
ar4r2_scaffold_23732 Species: Thiomonas intermedia (100%)	2	1230 bp	57.15	1.00	77.56
ar4r2_scaffold_21105 Species: Thiomonas sp. CB2 (50%)	2	981 bp	63.30	1.00	79.51
ar4r2_scaffold_19855 Species: Thiomonas intermedia (50%)	2	1545 bp	59.03	1.00	75.73
ar4r2_scaffold_28925 Species: Thiomonas arsenitoxydans (50%)	2	1001 bp	55.84	1.00	62.04
ar4r2_scaffold_13429 Species: Thiomonas intermedia (50%)	2	1902 bp	65.62	1.00	100.00
ar4r2_scaffold_19781 Species: Thiomonas arsenitoxydans (50%)	2	1515 bp	55.38	1.00	77.82
ar4r2_scaffold_24041 Species: Thiomonas sp. CB2 (100%)	2	1276 bp	66.93	1.00	92.16
ar4r2_scaffold_25267	2	1202 bp	51.50	1.00	16.72
ar4r2_scaffold_19916 Species: Thiomonas sp. CB2 (100%)	2	1507 bp	69.01	1.00	99.73
ar4r2_scaffold_16494 Species: Thiomonas arsenitoxydans (50%)	2	1675 bp	67.40	1.00	84.72
ar4r2_scaffold_12135 Species: Thiomonas intermedia (50%)	2	2241 bp	66.44	1.00	95.98
ar4r2_scaffold_23064 Species: Thiomonas intermedia (50%)	2	1256 bp	63.38	1.00	93.63
ar4r2_scaffold_14065 Species: Thiomonas sp. CB2 (100%)	2	2371 bp	55.76	1.00	63.01
ar4r2_scaffold_20177 Species: Thiomonas arsenitoxydans (50%)	2	1517 bp	65.66	1.00	94.53
ar4r2_scaffold_20805 Species: BJP_08E140C01_10KDA_Burkholderiales_65_51 (100%)	2	1482 bp	68.22	1.00	99.80
ar4r2_scaffold_22619 Species: Thiomonas sp. CB2 (50%)	2	1448 bp	66.51	1.00	98.20
ar4r2_scaffold_20718 Species: Thiomonas arsenitoxydans (50%)	2	1666 bp	62.91	1.00	99.58
ar4r2_scaffold_32942 Species: Thiomonas arsenitoxydans (50%)	2	1261 bp	65.42	1.00	95.16
ar4r2_scaffold_25330 Species: Thiomonas intermedia (50%)	2	1181 bp	62.66	1.00	59.19
ar4r2_scaffold_13755 Species: Thiomonas sp. CB2 (100%)	2	1938 bp	60.84	1.00	100.16
ar4r2_scaffold_20681 Species: Thiomonas arsenitoxydans (100%)	2	1456 bp	62.16	1.00	98.08
ar4r2_scaffold_27383 Species: Thiomonas intermedia (50%)	2	1250 bp	56.80	1.00	59.04
ar4r2_scaffold_15622 Species: Thiomonas arsenitoxydans (100%)	2	1993 bp	65.38	1.00	94.83
ar4r2_scaffold_13456 Species: Thiomonas sp. CB2 (100%)	2	2150 bp	67.81	1.00	98.23
ar4r2_scaffold_27194 Species: mine drainage metagenome (50%)	2	1087 bp	54.46	1.00	41.67
ar4r2_scaffold_15678 Species: Thiomonas intermedia (50%)	2	1895 bp	56.31	1.00	76.31
ar4r2_scaffold_21304 Species: Thiomonas arsenitoxydans (50%)	2	1509 bp	67.73	1.00	100.20
ar4r2_scaffold_12497 Species: Thiomonas intermedia (50%)	2	2189 bp	37.14	1.00	9.87
ar4r2_scaffold_20608 Species: Thiomonas arsenitoxydans (50%)	2	1423 bp	64.93	1.00	94.24
ar4r2_scaffold_15600 Species: Thiomonas arsenitoxydans (50%)	2	1813 bp	55.27	1.00	64.37
ar4r2_scaffold_13438 Species: Thiomonas intermedia (100%)	2	2050 bp	67.95	1.00	96.88
ar4r2_scaffold_11824 Species: Thiomonas intermedia (50%)	2	2414 bp	54.14	1.00	78.42
ar4r2_scaffold_25560 Species: mine drainage metagenome (50%)	2	1095 bp	63.38	1.00	72.88
ar4r2_scaffold_20703 Species: Thiomonas sp. CB2 (50%)	2	1557 bp	56.33	1.00	73.22
ar4r2_scaffold_11848 Species: Thiomonas arsenitoxydans (50%)	2	2413 bp	67.84	1.00	80.32
ar4r2_scaffold_31079 Species: Thiomonas intermedia (50%)	2	1043 bp	57.53	1.00	96.64
ar4r2_scaffold_30447 Species: Thiomonas intermedia (50%)	2	1233 bp	55.23	1.00	40.39
ar4r2_scaffold_27909 Species: Thiomonas arsenitoxydans (50%)	2	1009 bp	64.02	1.00	71.95
ar4r2_scaffold_10514 Species: Thiomonas sp. CB2 (50%)	2	2663 bp	55.54	1.00	33.57
ar4r2_scaffold_22786 Species: mine drainage metagenome (50%)	2	1590 bp	68.99	1.00	95.47
ar4r2_scaffold_19673 Species: Thiomonas intermedia (50%)	2	1570 bp	60.19	1.00	71.47
ar4r2_scaffold_31897 Species: Thiomonas arsenitoxydans (50%)	2	963 bp	65.42	1.00	97.82
ar4r2_scaffold_10791 Species: Thiomonas arsenitoxydans (50%)	2	2463 bp	62.28	1.00	89.65
ar4r2_scaffold_30622 Species: Thiomonas sp. CB2 (100%)	2	1093 bp	59.84	1.00	97.99

Displaying items 651-700 of 872 in total

ALUMROCK_MS4_Thiomonas_64_15_curated

ALUMROCK_MS4_Thiomonas_62_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

ALUMROCK_MS4_Thiomonas_64_15_curated

ALUMROCK_MS4_Thiomonas_62_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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