ggKbase | organisms

Consensus taxonomy: Thiomonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Metagenomic Context

Parent: ALUMROCK_MS4_Thiomonas_64_15 Manually curated genome
Original version: ALUMROCK_MS4_Thiomonas_64_15

Properties

Avg. coverage: 1.00 Longest contig: 23.85 Kbp Bin length: 2.69 Mbp GC content: 61.79 %

Contigs count: 872 Features count: 3312 rRNAs count: 0 tRNAs count: 23

Genome completeness

partial RP 38 / 55 MC: 2 BSCG 40 / 51 MC: 2 ASCG 9 / 38 MC: 2

Displaying items 201-250 of 872 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
ar4r2_scaffold_20703 Species: Thiomonas sp. CB2 (50%)	2	1557 bp	56.33	1.00	73.22
ar4r2_scaffold_11848 Species: Thiomonas arsenitoxydans (50%)	2	2413 bp	67.84	1.00	80.32
ar4r2_scaffold_31079 Species: Thiomonas intermedia (50%)	2	1043 bp	57.53	1.00	96.64
ar4r2_scaffold_30447 Species: Thiomonas intermedia (50%)	2	1233 bp	55.23	1.00	40.39
ar4r2_scaffold_27909 Species: Thiomonas arsenitoxydans (50%)	2	1009 bp	64.02	1.00	71.95
ar4r2_scaffold_10514 Species: Thiomonas sp. CB2 (50%)	2	2663 bp	55.54	1.00	33.57
ar4r2_scaffold_22786 Species: mine drainage metagenome (50%)	2	1590 bp	68.99	1.00	95.47
ar4r2_scaffold_19673 Species: Thiomonas intermedia (50%)	2	1570 bp	60.19	1.00	71.47
ar4r2_scaffold_31897 Species: Thiomonas arsenitoxydans (50%)	2	963 bp	65.42	1.00	97.82
ar4r2_scaffold_10791 Species: Thiomonas arsenitoxydans (50%)	2	2463 bp	62.28	1.00	89.65
ar4r2_scaffold_30622 Species: Thiomonas sp. CB2 (100%)	2	1093 bp	59.84	1.00	97.99
ar4r2_scaffold_14015 Species: Thiomonas arsenitoxydans (50%)	2	2010 bp	56.52	1.00	71.79
ar4r2_scaffold_22785 Species: Thiomonas intermedia (50%)	2	1334 bp	64.92	1.00	85.68
ar4r2_scaffold_14936 Species: Thiomonas arsenitoxydans (100%)	2	2104 bp	61.64	1.00	91.68
ar4r2_scaffold_8914 Species: Thiomonas intermedia (50%)	2	2594 bp	53.20	1.00	26.25
ar4r2_scaffold_7912 Species: Thiomonas intermedia (50%)	2	3713 bp	66.50	1.00	99.46
ar4r2_scaffold_15366 Species: Thiomonas arsenitoxydans (100%)	2	2024 bp	60.38	1.00	78.11
ar4r2_scaffold_24019 Species: mine drainage metagenome (50%)	2	1274 bp	59.89	1.00	47.33
ar4r2_scaffold_23304 Species: Thiomonas intermedia (100%)	2	1343 bp	58.75	1.00	89.35
ar4r2_scaffold_26693 Species: Thiomonas sp. CB2 (100%)	2	1306 bp	67.92	1.00	93.95
ar4r2_scaffold_15499 Species: Thiomonas sp. CB2 (50%)	2	1909 bp	58.83	1.00	97.75
ar4r2_scaffold_9208 Species: Thiomonas sp. CB2 (50%)	2	2948 bp	68.49	1.00	98.51
ar4r2_scaffold_11240 Species: Thiomonas sp. CB2 (50%)	2	2522 bp	64.63	1.00	95.52
ar4r2_scaffold_23078 Species: Thiomonas sp. CB2 (50%)	2	1392 bp	67.31	1.00	99.14
ar4r2_scaffold_25986 Species: Thiomonas intermedia (50%)	2	809 bp	68.36	1.00	99.01
ar4r2_scaffold_19463 Species: Thiomonas intermedia (50%)	2	1570 bp	59.49	1.00	95.35
ar4r2_scaffold_22952 Species: Thiomonas intermedia (50%)	2	1365 bp	63.88	1.00	90.33
ar4r2_scaffold_22976 Species: Thiomonas intermedia (50%)	2	1364 bp	58.87	1.00	80.06
ar4r2_scaffold_27657 Species: Thiomonas intermedia (50%)	2	1163 bp	66.64	1.00	80.48
ar4r2_scaffold_27306 Species: Acidovorax sp. MR-S7 (50%)	2	1344 bp	59.30	1.00	65.18
ar4r2_scaffold_24534 Species: Salmonella enterica (50%)	2	1331 bp	58.68	1.00	66.27
ar4r2_scaffold_12253 Species: Thiomonas arsenitoxydans (50%)	2	2338 bp	61.21	1.00	71.81
ar4r2_scaffold_25615 Species: Thiomonas sp. CB2 (50%)	2	1207 bp	57.75	1.00	78.79
ar4r2_scaffold_21464 Species: Thiomonas arsenitoxydans (50%)	2	1446 bp	64.59	1.00	89.00
ar4r2_scaffold_19047 Species: Thiomonas intermedia (50%)	2	1601 bp	54.47	1.00	43.10
ar4r2_scaffold_18299	2	1116 bp	57.89	1.00	16.40
ar4r2_scaffold_20828 Species: Thiomonas arsenitoxydans (100%)	2	1387 bp	65.97	1.00	100.14
ar4r2_scaffold_12330 Species: Thiomonas arsenitoxydans (100%)	2	2556 bp	68.43	1.00	97.42
ar4r2_scaffold_21536 Species: Thiomonas arsenitoxydans (50%)	2	1475 bp	59.25	1.00	89.56
ar4r2_scaffold_25716 Species: Thiomonas intermedia (100%)	2	1557 bp	66.41	1.00	95.95
ar4r2_scaffold_14837 Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)	2	2014 bp	65.49	1.00	74.78
ar4r2_scaffold_9589 Species: Thiomonas arsenitoxydans (50%)	2	2911 bp	69.63	1.00	98.83
ar4r2_scaffold_28729 Species: Thiomonas arsenitoxydans (50%)	2	1115 bp	67.80	1.00	93.36
ar4r2_scaffold_11587 Species: Thiomonas intermedia (50%)	2	2545 bp	64.24	1.00	95.72
ar4r2_scaffold_22736 Species: Thiomonas arsenitoxydans (100%)	2	1327 bp	54.03	1.00	80.03
ar4r2_scaffold_31702 Species: Thiomonas intermedia (50%)	2	966 bp	59.21	1.00	95.96
ar4r2_scaffold_9235 Species: RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (50%)	2	2508 bp	59.93	1.00	57.42
ar4r2_scaffold_17776 Species: Thiomonas sp. CB2 (50%)	2	1652 bp	68.22	1.00	97.52
ar4r2_scaffold_15944 Species: Candidatus Scalindua brodae (50%)	2	2242 bp	58.47	1.00	91.39
ar4r2_scaffold_16953 Species: Thiomonas arsenitoxydans (100%)	2	1740 bp	64.60	1.00	73.62

Displaying items 201-250 of 872 in total

ALUMROCK_MS4_Thiomonas_64_15_curated

ALUMROCK_MS4_Thiomonas_62_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

ALUMROCK_MS4_Thiomonas_64_15_curated

ALUMROCK_MS4_Thiomonas_62_1

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

Processing

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