ggKbase home page

ar4r2_scaffold_7126_6

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(6547..7668)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 358.0
  • Bit_score: 552
  • Evalue 4.50e-154
tRNA 2-selenouridine synthase (EC:2.9.1.-) similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 363.0
  • Bit_score: 389
  • Evalue 6.00e-106
tRNA 2-selenouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRB0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 358.0
  • Bit_score: 552
  • Evalue 3.20e-154
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGTTGAAAACCCGCCAAGATTTGCCCTTAATCGACGACTTGCAAGCGTTGTTTTTGCGTGATGTGCCGCTGCTGGATGTACGTGCGCCCGTCGAATTCCATGAAGGGGCATTTCCCACTGCGCAAAATCACCCGTTAATGGATGACGCAGATCGGGTGGCGATTGGCACGCGCTATAAGCAACAAGGGCAGGACGCGGCGATTGCATTGGGTTTGCAGCGTGTCAGTGGAGAGGTAAAAGCACAGCGGGTGGCGGCGTGGGAACAATTCGCGCGGGAACATCCTGACGGGGTGTTGTACTGTTTTCGCGGTGGCTTGCGTTCGCGGATTTCACAGCAATGGTTATTTGAGCAAACTGGCCTACATTACCCGCGTGTCAAAGGCGGCTATAAAGCGATGCGGCGGTTTTTGCTGAATCAGCTTGAAACCTTACCGGCAACCTTACAACCCGTGGTGTTGAGTGGGTGTACCGGCTCTGGAAAAACCCGCTTTTTGCAAACTTTGCAACGTACTGTGGATTTGGAAGGTTTAGCCAATCACCGTGGTTCTGCTTTTGGGGGGCAACCGACCCCGCAACCGAGTCAAATCAGTTTTGAAAACGCGCTGGCGATTCAATTATTGCGTGCGCTGCAAACTCAATCCGCGCTGTTATTTGAAGATGAAAGTCGCATGATTGGCTCATTGCATTTACCGGAAACGTTTTTCACGCGCTTGCGGGAAGCACCGTTGGTATTGATGCAGGTGGCGGATGCCGAGCGCGTGGAAATCAGTTACCAAGAATACGTGGTGGATACCAGCGCGGCTTTTACGACGTTACATCACGGTGATGTGGAACGTGGTTTTGCGGCATTTAGTGGGTATTTGTTAGGCAGTTTGGATAAAATCCAGCGGCGTTTGGGTGGCGTGCGCTATCAAGCGGTGTTGAAGATGATGCAGCAGGCGTTGGCGATACAGGCGCGTGACGGCACGACGCAGGCGCATTACGACTGGGTGCGGCTGATTTTGCTGGACTATTACGACCCGATGTACGACTACCAGATCAGCAAAAAGCAGGAACGTCTGGTATTCAGTGGTTCACCTGCTGAAGTGCGTGATTACCTCTGCCAAGTGGGGATTGTGTAA
PROTEIN sequence
Length: 374
MLKTRQDLPLIDDLQALFLRDVPLLDVRAPVEFHEGAFPTAQNHPLMDDADRVAIGTRYKQQGQDAAIALGLQRVSGEVKAQRVAAWEQFAREHPDGVLYCFRGGLRSRISQQWLFEQTGLHYPRVKGGYKAMRRFLLNQLETLPATLQPVVLSGCTGSGKTRFLQTLQRTVDLEGLANHRGSAFGGQPTPQPSQISFENALAIQLLRALQTQSALLFEDESRMIGSLHLPETFFTRLREAPLVLMQVADAERVEISYQEYVVDTSAAFTTLHHGDVERGFAAFSGYLLGSLDKIQRRLGGVRYQAVLKMMQQALAIQARDGTTQAHYDWVRLILLDYYDPMYDYQISKKQERLVFSGSPAEVRDYLCQVGIV*