ggKbase home page

ar4r2_scaffold_18532_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(1857..3197)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 446.0
  • Bit_score: 798
  • Evalue 3.30e-228
tRNA modification GTPase MnmE n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUH8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 446.0
  • Bit_score: 798
  • Evalue 2.40e-228
  • rbh
trmE; tRNA modification GTPase TrmE similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 449.0
  • Bit_score: 533
  • Evalue 3.10e-149
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1341
ATGTGGAACAATCCTGACACCATCGCTGCCGTAGCCACGCCGCCGGGGCGCGGTGGGGTCGGGATTATCCGGCTTTCCGGCAAGCTTGTTCCTGAGCTTGCCCTCGGTATTCTTGGCTCTTTGCCCTCCCCGCGTAAAGCGGTTCACCGTTTGTTTAAAGCTGCCGATGGCACGGCGTTAGATGACGGTATCGCATTGTATTTCCCTACCCCACATTCATTCACTGGCGAAGATGTGTTAGAGCTGCAAGGTCATGGCGGCACGGTCGTGCTGGATATGCTGCTCAAACGCTGTGTGGAACTGGGTGCGCGATTGGCTCGCCCCGGCGAGTTTTCCGAACGTGCCTTTTTAAACGACAAGCTGGATTTGGCGCAGGCGGAAGCGATTGCCGATTTGATTGATTCGGGGTCGGAACAGGCAGCGCGGTCGGCGTTGCGTTCTTTGCAGGGTGAATTTTCCACTGCCGTGAATGTGTTGCTCACGGGCTTGATTGAATTGCGGGTATATGTGGAAGCCGCGTTGGATTTCCCCGATGAGGAAATCGACTTTCTCGCGGATGTCGCGGTGACTAACCGGCTGGAAAGCATTAAACAGCAATTACACACGATTTTCCTGAAAGCGCGGCAAGGCAGCTTATTGCGTGACGGGATGCATCTGGTGATTGTTGGCAGACCCAACGCGGGCAAGTCGAGCTTGCTGAATGCATTGGCTGGGCAGGAAACCGCCATTGTCACCGAAATTGCCGGAACCACGCGCGATGTGTTGCGGGAACGCATTAACCTCGACGGAATGCCGCTGCACATTGTCGATACCGCAGGTTTGCGCGAAAGTGATGATCCGGTGGAAAAGATTGGCATTGAACGCGCTTGGGCGGAAATTGCTAAAGCGGATTTGATCCTGTTGCTGGTGGATGATACCCGCCATGATGAACCGGAAAATGCGGACATTCTGGCACGCTTACCCCCTCACCTGCCGCGTATTACCGTGCATAATAAAGTCGATTTAAGCGGCAAACTCCCCGGTAAACAGGGTGAACATCTGTATATTTCTGCGAAACAATCCTTGGGTATTGATGCGTTACGTGCCGAGTTGAAAACCCGGATGGGCTATCAGGGCGAGGCGGAAGATACCTTCATCGCGCGACGGCGGCATTTGCAGGCATTGGCAGAAACGCAGGCAGCGGTGGAACGGGCGGAGTATCAGTTGCGTGAATTCAATGCGGGCGAATTGATGGCGGAAGAGTTGCGTACTGCACAGGATGCTTTGGGACAAATTACGGGGCGGTTTACGCCGGATGATTTGTTAGGCGAGATTTTTAGTTCGTTTTGCATCGGAAAGTAG
PROTEIN sequence
Length: 447
MWNNPDTIAAVATPPGRGGVGIIRLSGKLVPELALGILGSLPSPRKAVHRLFKAADGTALDDGIALYFPTPHSFTGEDVLELQGHGGTVVLDMLLKRCVELGARLARPGEFSERAFLNDKLDLAQAEAIADLIDSGSEQAARSALRSLQGEFSTAVNVLLTGLIELRVYVEAALDFPDEEIDFLADVAVTNRLESIKQQLHTIFLKARQGSLLRDGMHLVIVGRPNAGKSSLLNALAGQETAIVTEIAGTTRDVLRERINLDGMPLHIVDTAGLRESDDPVEKIGIERAWAEIAKADLILLLVDDTRHDEPENADILARLPPHLPRITVHNKVDLSGKLPGKQGEHLYISAKQSLGIDALRAELKTRMGYQGEAEDTFIARRRHLQALAETQAAVERAEYQLREFNAGELMAEELRTAQDALGQITGRFTPDDLLGEIFSSFCIGK*