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ar4r2_scaffold_12071_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(4216..4848)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 196.0
  • Bit_score: 351
  • Evalue 5.10e-94
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRR6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 196.0
  • Bit_score: 351
  • Evalue 3.60e-94
  • rbh
rlmE_[H]; Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 192.0
  • Bit_score: 273
  • Evalue 3.50e-71

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GTGTGCGCGAGTGCGCAGTCGTTTTTTCTGAGTTTCGTTCAGTTAGGTGAACATTTTAGTGATGAATTTGTCAAAAAAGCACAGCAAGAAGGTTATCGTTCGCGTGCAGTTTACAAATTAAAGGAAATTCAGGAGAAAGATCGCATTATTCAGCCCTGCATGAAAGTGCTGGATTTGGGTGCAGCTCCCGGTGGATGGAGCCAGTATGCGACACAATTGATCGGGCGCAAAGGCCGGATCGTGGCGAGTGATATTTTGCCATTAGACCCGTTGCCGTTTGTGGAGTTTGTGCTGGGTGACTTCCGCGACGATGCCGTTTTAACCGAAATTTTAGGGTTATTGGGCGATGACAAGGCGGATCTTGTAATTTCGGATATGGCTCCCAATATGAGTGGTGTAGATGCTGTGGATCAGCCACGCGCCGTTCATCTATGTGAACTTGCTTTAGACATGGCGCGACAGGTATTAAAGCCGGGTGGAGCCTTTTTAGTGAAGCTTTTTCAAGGCGCAGGTTCAGAAGAGTATATGCGTGAAGTGCGCAGTAGCTTCAAAACTGTGAAAGTGAGAAAGCCAGCAGCCTCAAGACCCCGCAGCAGGGAAGTTTATGTGCTTGCCCAAGGTTTTGTGGTGTAA
PROTEIN sequence
Length: 211
VCASAQSFFLSFVQLGEHFSDEFVKKAQQEGYRSRAVYKLKEIQEKDRIIQPCMKVLDLGAAPGGWSQYATQLIGRKGRIVASDILPLDPLPFVEFVLGDFRDDAVLTEILGLLGDDKADLVISDMAPNMSGVDAVDQPRAVHLCELALDMARQVLKPGGAFLVKLFQGAGSEEYMREVRSSFKTVKVRKPAASRPRSREVYVLAQGFVV*