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ar4r2_scaffold_9518_10

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(5810..6352)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 178.0
  • Bit_score: 307
  • Evalue 7.20e-81
rluE; ribosomal large subunit pseudouridine synthase E (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 72.6
  • Coverage: 179.0
  • Bit_score: 277
  • Evalue 1.60e-72
Pseudouridine synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWF9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 178.0
  • Bit_score: 307
  • Evalue 5.10e-81
  • rbh

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGTCACGGATTATTTTGTTTAACAAGCCGTATGACGTGCTGTGCCAGTTTACGGATGGTCAAGGCCGTCAAACCCTCGCGGATTTCGTCCCTGTTCCTGGTGTGTATGCCGCCGGACGTTTAGACCGTGACAGTGAAGGCTTATTGCTGTTAACCGATGACGGGCGTTTGCAGCATAAAATTGCCGACCCTAAACACAAAACCAGCAAGACCTATTGGGTGCAAGTGGAAGGCACGCCGAGCGACGCAGCGTTACAGCCGTTGCGTGATGGGGTAATGCTCAACGATGGCATGACGCGCCCCGCGACGGTGACGATTATTCCAGAACCGCCGGGATTATGGGCGCGACAACCACCGATTCGGGTGCGTAAAGCGATTCCCGATGCCTGGTTAGCGATTACCATCAGCGAAGGGCGTAATCGTCAGGTGCGGCGTATGACAGCGGCGGTGGGGTTCCCGACGTTGCGTTTAATTCGTTATCGCATTGGTTCTTGGACGCTTGATGGTCTCGCCAGTGGTGAATGGAGTGATGCAGGTGTGTGA
PROTEIN sequence
Length: 181
MSRIILFNKPYDVLCQFTDGQGRQTLADFVPVPGVYAAGRLDRDSEGLLLLTDDGRLQHKIADPKHKTSKTYWVQVEGTPSDAALQPLRDGVMLNDGMTRPATVTIIPEPPGLWARQPPIRVRKAIPDAWLAITISEGRNRQVRRMTAAVGFPTLRLIRYRIGSWTLDGLASGEWSDAGV*