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ar4r2_scaffold_58940_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(1..1722)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 589.0
  • Bit_score: 995
  • Evalue 1.80e-287
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 589.0
  • Bit_score: 995
  • Evalue 1.30e-287
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 580.0
  • Bit_score: 661
  • Evalue 1.60e-187
  • rbh

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1722
ATTTCCGAACGCCTGAAAACGCTGGCGACGCTGCAAAACCTGAAACGTGGCATCCTGATTGTGCCAGCCACCACACTCTTACATCGGTTAGCACCCACCAGTTATGTGCATGGTTACACCTTCATGGTGCGCAAAGGTTCGCCGCTCAATATCGACAAACTGCGCAAGCAACTCGAAGAAGCAGGCTACCGCAACGTCAGTCAGGTGATGGCGCATGGCGAATACGCTACCCGTGGTTCGCTGGTCGATTTGTTCCCGATGGGCAGCCAGACGCCCTATCGCATTGATTTGTTCGACGAGGAAATCGACTCGATCCGCACGTTCAACCCGGAAACGCAGCGGACAGATATGGTGGTGGATACCATTGAGTTGCTACCAGCGCGGGAATTTCCGCTGGATGAAGCCGGAATCCGTACCTTCCGCCAGAATTACCGGGCGCAAGTCGAAGGCGATTTGACCCGCAGCCGCATTTACGAAGGCGTGAGTCAGGGCAAGCTGCCAGCGGGGATTGAATATTACTTGCCGCTGTTCTTTGAGCATACCGCGACGTTGTTTGATTATTTGCCGAAGAAAACGCTGCTGGTATTGGCGGAAGGGGTTGATGCTGCCGTCAAAACGTTCTGGGAAACGGTGGAATATCGGTATGAGCAGCGGCGGCATGATATTGAAAGGCCGTTGCTTGCGCCGGAGAAGTTGTTTTTGACGGCGGCGATGTTGGGGAGTTGGGTTGGGGATTATCCACGAGTTGAGGTACAGCGGTTTAAACACGAAACCGAAGGGCTGAACTACCCCATCGCCGCCCTCCCCTCGCTGCTCATTCACGCCCGCCAAGAACAGCCCCTGTTCCTGCTGTTCAATTTCCTCAAAGACCTGAAAGGCCGCGTGCTATTCACCGCCGAATCTGCCGGGCGGCGCGAAGCCTTCCTCACCCTGCTGAAAGACAACGGCATCGCGGTCAAAACGCTGGAAACCTGGCAGGATTTCCTCGGTAGCAAAGCGGAAATGGCAGTCACTGTCGCGCCGCTGGAAAATGGTTTCTGGCTGCCGGATGCAAAGATTGCGGTCATTCCCGAAAACCTGCTGCATGGAGTGCAAATCCAGCAGCAACGCCGTCGCCGCAAAGCCACCCGCGATGCCGATGCGATTATCCGCAACCTCACCGACCTTTCCGAAGGTGCGCCCGTGGTGCATGAGGAACACGGCGTGGGGCGTTATCTGGGCTTGCAGACGGTGACTGCGGGCGGGGTGACGGCGGAATATTTGCTGATCGAATACGCTAACCACGACAAGCTGTACGTCCCCGTTGCCGCGTTGCATCTGGTCAGCCGTTACACAGGTGCTGACCCGGAACACGCGCCCTTGCACCGTCTCGGCAATGAGCAATGGGACAAGGCGCGGCAAAAAGCGGCGGAAAAGGCGCGGGATGTGGCGGCGGAATTGCTCGACATCCACGCCCGCCGTGCCGCGCAGCAGGGGCATAGTTTCCCGTTTGACGACAACGATTACCGCCTGTTTGCGGGCGCGTTCCCGTTTGAGGAAACGCCGGATCAGGCACTGGCGATTGAAAACGTGATCAAGGACATGCGTGCGCCGCAACCGATGGATCGGGTGGTGTGCGGCGACGTGGGTTTCGGCAAGACCGAAGTGGCGATGCGGGCAGCGTTCGTGGCGGCGAATGCGGGCAAGCAGGTGGCGATGATTGCGCCGACCACCCTGCTGGTG
PROTEIN sequence
Length: 574
ISERLKTLATLQNLKRGILIVPATTLLHRLAPTSYVHGYTFMVRKGSPLNIDKLRKQLEEAGYRNVSQVMAHGEYATRGSLVDLFPMGSQTPYRIDLFDEEIDSIRTFNPETQRTDMVVDTIELLPAREFPLDEAGIRTFRQNYRAQVEGDLTRSRIYEGVSQGKLPAGIEYYLPLFFEHTATLFDYLPKKTLLVLAEGVDAAVKTFWETVEYRYEQRRHDIERPLLAPEKLFLTAAMLGSWVGDYPRVEVQRFKHETEGLNYPIAALPSLLIHARQEQPLFLLFNFLKDLKGRVLFTAESAGRREAFLTLLKDNGIAVKTLETWQDFLGSKAEMAVTVAPLENGFWLPDAKIAVIPENLLHGVQIQQQRRRRKATRDADAIIRNLTDLSEGAPVVHEEHGVGRYLGLQTVTAGGVTAEYLLIEYANHDKLYVPVAALHLVSRYTGADPEHAPLHRLGNEQWDKARQKAAEKARDVAAELLDIHARRAAQQGHSFPFDDNDYRLFAGAFPFEETPDQALAIENVIKDMRAPQPMDRVVCGDVGFGKTEVAMRAAFVAANAGKQVAMIAPTTLLV