ggKbase home page

ar4r2_scaffold_9976_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: 178..753

Top 3 Functional Annotations

Value Algorithm Source
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 191.0
  • Bit_score: 350
  • Evalue 1.30e-93
Aminoacyl-tRNA hydrolase (EC:3.1.1.29) similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 188.0
  • Bit_score: 256
  • Evalue 4.10e-66
Peptidyl-tRNA hydrolase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQS3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 191.0
  • Bit_score: 350
  • Evalue 9.50e-94
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGGGAACCCCTATTCGCCTCATTGCAGGCTTGGGCAACCCCGGTAGCCAGTACGACAAAACCCGGCACAATGCCGGGTTTTGGTTTGTTGACGAACTGGCAAGGCGTTACTCCGGCAAATTTGCTGTCGAGAAGCGTTTTTCCGGTGAAGTCTGTAAACTACAAGTCGGTAGCACGGTGGTATGGTTGATCAAGCCCATGATCTTCATGAACCGCAGCGGTTTGTCAGTTAAACAATTGGCACAATTCTACCAAATTCCGGTAGAACAAATTTTGGTTGCGCACGATGAGTTGGACATTGCTCCGGGTGAAGTTCGCTTGAAACAAGCGGGTGGTCACGGTGGACACAACGGTTTGCGCGACTGTCATGCGCATTTGAGCGCAGAGTATTGGCGGTTGCGGCTGGGTGTTGGACATCCGGGCGATCGCAACAAAGTGGTTGATTATGTGCTGTCACGCCCATCATTGGATGATGAAATCGTTATTTTACGTGCGATTGACAAAGCAGCCGACCAGATTGAATTGATTTTAGCCGGTGACATGCAGAAAGCGATGAACGCACTGCACACTAAGTAA
PROTEIN sequence
Length: 192
MGTPIRLIAGLGNPGSQYDKTRHNAGFWFVDELARRYSGKFAVEKRFSGEVCKLQVGSTVVWLIKPMIFMNRSGLSVKQLAQFYQIPVEQILVAHDELDIAPGEVRLKQAGGHGGHNGLRDCHAHLSAEYWRLRLGVGHPGDRNKVVDYVLSRPSLDDEIVILRAIDKAADQIELILAGDMQKAMNALHTK*