ggKbase home page

ar4r2_scaffold_6683_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(506..2218)

Top 3 Functional Annotations

Value Algorithm Source
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 567.0
  • Bit_score: 1023
  • Evalue 1.10e-295
Proline--tRNA ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNB2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 567.0
  • Bit_score: 1023
  • Evalue 7.60e-296
  • rbh
prolyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 570.0
  • Bit_score: 834
  • Evalue 1.40e-239
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGCGAGTTTCTCGATTTCCTATTACCACCCTGCGTGAAACACCCGCAGACGCTGAAGTTGTCAGCCACCAGTTAATGCTGCGGGCTGGCATGATCCGCCGCCTTGCATCCGGTTTGTATACATGGATGCCGTATGGCTTGCGCGTGCTGCGCAAGGTCGAAGCCATCGTGCGTGAAGAAATGAACAACGCGGGTGCTATCGAAGTGCTGATGCCTTCGGTGCAGCCTGCCGAGTTGTGGCAAGAATCCGGGCGTTGGGAAAAGTACGGTGCGGAATTACTGCGCATTCGTGACCGTCACCAGCGCGATTTCTGCTACGGCCCAACCCACGAAGAAATCATTACCGATTACGCGCGTAAGGAATTGAGCAGCTACAAGCAGTTGCCGATCAATTTCTACCAGATTCAAACCAAATTCCGTGACGAAGTGCGTCCGCGTTTCGGGGTAATGCGTGCGCGTGAATTCTTGATGAAGGATGCTTACTCCTTCCACGCCACCCAGGAATCGTTGCAGGAAACCTACGACACCATGTTTGCGGCGTATTCGCGCATCTTCCAGCGTTTGGGCTTGGATTTCCGCCCGGTGCAAGCCGATACCGGCTCGATTGGGGGCAACGCTTCGCACGAATTCCACGTATTGGCAGATTCCGGTGAAGACGCAATTGCGTTCGCCAGTGGCAGCAACTACGCCGCCAATATCGAGTTGGCAGAAGCGGTTTGCCTGATTGCTGAACGCGCCGCGCCCACTGAAACGATGCGTGAAGTCGACACACCAAACGCCAAAACCATCGAAGAATTGGTGGAACAATTTGGCATGGCGATTGAAAAAACCGTCAAAACCCTGATCGTGGCAGCCGCCGAAGACGCGGAATACGATTTCGTCGCGCTCCTTGTACGTGGCGATCACACCTTAAATGAAATCAAAGCGGAAAAAATCCCCGGCGTTGCCGTGCCGTTGCGTTTTGCCCGCGAAGATGAAATTCGCCCACTCATCGGTGCAGGCCCCGGTTCTTTAGGCCCGGTCGGTTTAAAAATTCCGGTCATCGCTGACCGCACTGTAGCGAATATGTCCGACTTCGGCGCAGGCGCGAATGTCGACGGCAAACACTTTTTCGGCATCAACTGGGAATGCGATGTCGCGCTGCCGCAAGTCGCTGATCTGCGCAATGTGATCGAAGGCGACCCCAGCCCCGATGGTTGCGGCACGCTGTCTATCGTGCGCGGTATTGAAGTCGGTCATATCTTCCAGTTGGGCAAAACCTATTCGTCAAAACTCAACGCCACGGTGCTGGATGAAAGCGGTCGTGCACAAGTGATGACCATGGGTTGCTACGGCATCGGCGTTTCCCGCGTTGTTGCATCGGCGATTGAGCAAAACAACGACGAATTTGGCATCCGTTGGCCTGCGGCGATTGCGCCTTTCACCGTCGTGATTGCGCCGCTGAATATGCAGAAATCGCCGGATGTGGCAGCGAAAGCGGAAGAACTTTACGCACAATTGCAAGCAGCAGGCGTGGATGTATTGCTGGATGATCGCGCATTACGCCCCGGTGCAATGTTTGCCGACCATGAATTGCTGGGCATTCCGCACCGCCTCATTATCTCTGAGCGCGGCTTGCAAGCCGGTGAAATTGAATACAAAGCACGTAGCGGTGGCGATGCAGTGAAAATCCCCGTTGCTGACATTATCCATTTTGTGAAGGAAAAACTGTAA
PROTEIN sequence
Length: 571
MRVSRFPITTLRETPADAEVVSHQLMLRAGMIRRLASGLYTWMPYGLRVLRKVEAIVREEMNNAGAIEVLMPSVQPAELWQESGRWEKYGAELLRIRDRHQRDFCYGPTHEEIITDYARKELSSYKQLPINFYQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHATQESLQETYDTMFAAYSRIFQRLGLDFRPVQADTGSIGGNASHEFHVLADSGEDAIAFASGSNYAANIELAEAVCLIAERAAPTETMREVDTPNAKTIEELVEQFGMAIEKTVKTLIVAAAEDAEYDFVALLVRGDHTLNEIKAEKIPGVAVPLRFAREDEIRPLIGAGPGSLGPVGLKIPVIADRTVANMSDFGAGANVDGKHFFGINWECDVALPQVADLRNVIEGDPSPDGCGTLSIVRGIEVGHIFQLGKTYSSKLNATVLDESGRAQVMTMGCYGIGVSRVVASAIEQNNDEFGIRWPAAIAPFTVVIAPLNMQKSPDVAAKAEELYAQLQAAGVDVLLDDRALRPGAMFADHELLGIPHRLIISERGLQAGEIEYKARSGGDAVKIPVADIIHFVKEKL*