ggKbase home page

ar4r2_scaffold_16004_2

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(780..1673)

Top 3 Functional Annotations

Value Algorithm Source
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:EIJ35865.1}; EC=2.5.1.10 {ECO:0000313|EMBL:EIJ35865.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 297.0
  • Bit_score: 479
  • Evalue 2.30e-132
Farnesyl-diphosphate synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BWX2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 297.0
  • Bit_score: 479
  • Evalue 1.60e-132
  • rbh
farnesyl-diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 295.0
  • Bit_score: 365
  • Evalue 9.70e-99
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGTTAAATGTGCATACGCGCCTGCAAGGTTGGCAAGATCGCATTGAAACGGTATTAGACAGCGTGTTGCCTGCGGCTGCTACACATCCGCCGCGTTTGCATGAGGCGATGCGTTACAGCGTGTTGGACGGTGGTAAGCGGATGCGCCCGTTGCTGGTGTACGCAGCAGGTGAGGCGTTAGGTATTGCTCAGGCTCATTTGGATATTCCAGCGGCGGCGGTGGAGTTAATCCATGTGTATTCGTTGGTGCATGATGATTTACCCGCGATGGACGATGACGATTTACGACGCGGTAAACCGACTTGTCATAAAGCCTTTGATGAGGCGACGGCGATTTTAGTGGGTGATGGTTTGCAGGCGTTGGCGTTTCAATTGCTGGCGGCACACCCGAAACAGCACGCATCCCCTGCGCAACGTTTGCGTATGATTGAATTGCTGGCGCAAGCGGCTGGTTCACGCGGCATGGTGGGCGGGCAGGCGATTGATCTGGCAGCAGTCGGCAAGGTGTTGGGCGAAATCGAGCTGGAAAATATGCACATCCACAAAACCGGCGCGTTAATTCGTGCCAGCGTGTTGTTGGCGGCTTATAGTCTCGAAGTGGTGGATGCGCTGGCGGTGCAACGCCTTGATCATTTTGCCAAATGTTTAGGGCTGGCATTCCAAGTGCAAGACGATATTTTGGATGTGGAAAGCGATACCCAAACTTTGGGTAAAACCCGTGGCGCAGATGCCGCCGCAGGCAAGCCGACTTACCCTTCTATTATTGGCATGGCTGCTGCTAAAGCGAAATTACACGATTTACACACAGAGGCGTTGCACGCATTAGAGCCGTTTGGCGATGGCGCACACGCGCTGCGCGAAATAGCTGATTTTACCGTGAAGCGACTACGATGA
PROTEIN sequence
Length: 298
MLNVHTRLQGWQDRIETVLDSVLPAAATHPPRLHEAMRYSVLDGGKRMRPLLVYAAGEALGIAQAHLDIPAAAVELIHVYSLVHDDLPAMDDDDLRRGKPTCHKAFDEATAILVGDGLQALAFQLLAAHPKQHASPAQRLRMIELLAQAAGSRGMVGGQAIDLAAVGKVLGEIELENMHIHKTGALIRASVLLAAYSLEVVDALAVQRLDHFAKCLGLAFQVQDDILDVESDTQTLGKTRGADAAAGKPTYPSIIGMAAAKAKLHDLHTEALHALEPFGDGAHALREIADFTVKRLR*