ggKbase home page

ar4r2_scaffold_21727_3

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(1056..1601)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BPI6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 179.0
  • Bit_score: 318
  • Evalue 2.90e-84
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EIJ33279.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 179.0
  • Bit_score: 318
  • Evalue 4.10e-84
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 194
  • Evalue 1.80e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGCGTGTACTTATCGTTGAAGATGAAAAAATTATCCGCGAGCAGGTTGCTGATGATTTAAAGAAAAGCGGGTTCACCGTGGATGTCGCGGCTGATTACTCCCAAGGGCTGTATGTTGCGTTAGAGTATCCTATTGATGTTGCCGTCATTGACCTGGGATTACCCAGCACCAAAGGCGCACCCGTCAACAATGAACTGGGTTTGGACATTATTCGTACCGCCCGCGCCAAAGGCAAAGATTACCCTATTATTATTCTGACAGCGCGTGATCGCTGGCAGCACAAAGTTGAAGGTTTGGAATCCGGTGCTGATGATTACGTCACCAAACCATTCCACACCGAAGAATTGATCGCCCGTCTGCGGGTGCAATTGCGCCGTACCGGACGTTGGACGCAAGCTGAATTGAGTTGCGGCCCGATCCGTTTAAATACCTCAGAGCAACGGGTTCACGTCAATAATGACGAAGTTACCCTCACCGCTTACGAATACCGCGTCTTAGAACACCTGATGTTACACGCCGGAGAAGTTGTACGAAGAAGATGCTGA
PROTEIN sequence
Length: 182
MRVLIVEDEKIIREQVADDLKKSGFTVDVAADYSQGLYVALEYPIDVAVIDLGLPSTKGAPVNNELGLDIIRTARAKGKDYPIIILTARDRWQHKVEGLESGADDYVTKPFHTEELIARLRVQLRRTGRWTQAELSCGPIRLNTSEQRVHVNNDEVTLTAYEYRVLEHLMLHAGEVVRRRC*