ggKbase home page

ar4r2_scaffold_5957_1

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: 2..1030

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 341.0
  • Bit_score: 628
  • Evalue 4.60e-177
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV71_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 341.0
  • Bit_score: 628
  • Evalue 3.30e-177
  • rbh
rimO; ribosomal protein S12 methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 342.0
  • Bit_score: 528
  • Evalue 1.30e-147

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
TTAGCCGTCACCGGGCCTCATGCGTATGAAGCGGTGATGCAATCGGTGCATACCCATTTACCGCCGTTGCATGACCCGTACACCAGTCTTGTACCGCCGCAAGGGGTGCGTTTAACCCCGCGTCATTACGCTTACCTGAAAATCTCTGAAGGCTGTAATCACCGTTGTTCGTTCTGTATTATTCCATCGTTGCGTGGTGATTTGGTGTCGCGCCCGATTGGGGATGTGTTGCAGGAAGCCGAAAATCTGGTGAATGCCGGGGTGCGAGAATTGTTGGTGATTTCGCAAGACACCAGTGCTTACGGGATTGATGTTAAATATCGCACTGGTTTCTGGCAAGGTCGCCCGATTAAAACCCATTCGCAGCAATTGGCGGAAGCGTTGGGTGATATGGGTGTGTGGGTGCGTTTGCATTACGTTTACCCGTATCCGCACGTCGATAACCTGCTGCCGTTGATGGCAGACGGCAAAATCCTGCCGTATTTGGACATTCCGTTCCAACACGCCAGTCCCAGCGTCCTGAAAAATATGCGCCGTCCGGCTCATGCGGAAAAAGTGCTGGAACGTTTGGGTAAATGGCGCGATGTCTGCCCGGATATTGCGGTGCGCAGTACCTTTATCGTGGGCTTCCCCGGCGAAACCGACGATGATTTTGAAACCTTACTGGATTTCCTGCAAGAAGCCGAACTCGATCGCGTAGGGGCATTCACCTATTCAGCCGTCGAGGGTGCGCCTGCTAACGCGCTGGAAGGGGCAGTGCCGGAATCTGTGAAAGAAGAGCGTTTAGAGCGTTTCATGGAAGTGCAGGCTGACATCAGTGCCGCGAAACTCAGCCGCATGATCGGTAAAACCCTGACCGTATTAGTCGATGAAGCAGACGATGGGCAAAGCCTTGCTCGCAGTTATCGCGACGCACCGGAAATCGACGGGCAGGTGGTGATTGAAGGCGTGGAATTGCCAGTTGGTGAATTCGTGAAAGTGCGCGTTACTCATGCGGATGAGCATGATTTGTGGGCAGAGGTTATTTAG
PROTEIN sequence
Length: 343
LAVTGPHAYEAVMQSVHTHLPPLHDPYTSLVPPQGVRLTPRHYAYLKISEGCNHRCSFCIIPSLRGDLVSRPIGDVLQEAENLVNAGVRELLVISQDTSAYGIDVKYRTGFWQGRPIKTHSQQLAEALGDMGVWVRLHYVYPYPHVDNLLPLMADGKILPYLDIPFQHASPSVLKNMRRPAHAEKVLERLGKWRDVCPDIAVRSTFIVGFPGETDDDFETLLDFLQEAELDRVGAFTYSAVEGAPANALEGAVPESVKEERLERFMEVQADISAAKLSRMIGKTLTVLVDEADDGQSLARSYRDAPEIDGQVVIEGVELPVGEFVKVRVTHADEHDLWAEVI*