ggKbase home page

ar4r2_scaffold_13898_5

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(4273..5292)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 338.0
  • Bit_score: 525
  • Evalue 5.40e-146
DNA helicase/exodeoxyribonuclease V, alpha subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNT6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 338.0
  • Bit_score: 525
  • Evalue 3.80e-146
  • rbh
exodeoxyribonuclease V subunit alpha similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 365.0
  • Bit_score: 276
  • Evalue 8.80e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GCGCGTACTTTGCACCGTTTGCTGGGCTACATTCCCAACCGCGTGGGGTTTCGTCATCATGCTCAACATCCCTTACCCGCAGATGTGGTCATCGTGGATGAAGCCTCGATGATTGATATTTCCCTAATGACGCATTTATTTGAGGCGGTTTCGCCCTCGGCGCGGTTGATTTTGTTGGGGGATAAAGATCAATTGGCTTCGGTGGAAACCGGGTCGATTTTCCGCGATTTGTGCGAAGCCCCGGCGTTGCAAGCGCATCGTCAGGTATTGAATCGTAGTTACCGTTTCAGCGAGAGCGATGGGGTCGGGCAGTTAGCGCAGGCGATTCGTGCCGCTGATGAAACCCGTTTGCTGGCAGTGTTAGCCGCAGAGGAATTTCCTAGCGTTTCGTGGGATGAGAGCGGCGAAGGTTTGCAAGTGCAGTGGTTACAAGATGGCTGGCAAGCGTATGTCGCGGCAGTGCAAGCGGGTGATATTGCAGCGGTGTTTCAGGCGTTTAACGATTTGCGTATTTTAACCCCGTTGCGCCAAGGTCGTTTGGGTGTTGAAGGCTTGAATCCGTGGGTGGATAACGTGATGCAACGTTTGTTACCCACGCACGCGGGGGCGTTGCGCCCTTGGTATGTGGGCAGGCCGGTGATGGTGACGCAAAACGATTACCGTCAGGAATTGTTTAACGGCGATATTGGGATTGCACTACCGGATGCGCAAGGCGTGTTGCGGGTGTGGTTTCCGACGGCACAGGCGGGGGAGTTTCGTGCCGTCGCGCCGATTCGTTTGCCTGCCCACGAAACCGCTTGGGCGATGACGATTCATAAAAGTCAGGGGTCGGAATTTACCCGTGTGCTATTGCTGTTGCCGGATGTGGAAGATTCACCGCTGCTGGGGCGCGAATTGCTGTACACCGCTGTGACCCGTGCGAAACAGGGGATTCATGTGATTGCGAGTCGCGCTACGTTGCAACGGGCATTGCAACAGGTGATGCCGCCTGCGTCGTGTTTGCAGGAGAAACTAGCCTAG
PROTEIN sequence
Length: 340
ARTLHRLLGYIPNRVGFRHHAQHPLPADVVIVDEASMIDISLMTHLFEAVSPSARLILLGDKDQLASVETGSIFRDLCEAPALQAHRQVLNRSYRFSESDGVGQLAQAIRAADETRLLAVLAAEEFPSVSWDESGEGLQVQWLQDGWQAYVAAVQAGDIAAVFQAFNDLRILTPLRQGRLGVEGLNPWVDNVMQRLLPTHAGALRPWYVGRPVMVTQNDYRQELFNGDIGIALPDAQGVLRVWFPTAQAGEFRAVAPIRLPAHETAWAMTIHKSQGSEFTRVLLLLPDVEDSPLLGRELLYTAVTRAKQGIHVIASRATLQRALQQVMPPASCLQEKLA*