ggKbase home page

ar4r2_scaffold_6852_8

Organism: ALUMROCK_MS4_Thiothrix_nivea-related_50_537_curated

megabin RP 46 / 55 MC: 7 BSCG 48 / 51 MC: 12 ASCG 13 / 38 MC: 6
Location: comp(3572..3994)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 140.0
  • Bit_score: 247
  • Evalue 9.00e-63
Transcription-repair-coupling factor n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQL0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 140.0
  • Bit_score: 247
  • Evalue 6.40e-63
transcription-repair coupling factor Mfd similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 140.0
  • Bit_score: 165
  • Evalue 6.90e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GTGGAATTGGGTGTGCCTGCGCTGATCCCCGATGATTATTTGCCGGATGTGCATAGCCGCTTGATCCTCTACAAACGCATTGCCAGCGCGGTGTCGCAGGCGGCGCTGGACGAGTTGCGGGTGGAAATGATCGACCGCTTCGGGCTGCTGCCGAAGCAAACCAAGACGCTGTTCAGCGTCACGCGGCTGAAACTGATTGCGCAGGGCTTGGGCATCCGCAAGCTGGACGTGAACGCCAAGGGCGGGCGCATGATCTTTGAGGATAAGCCGGCTATTGACCCGATGAAGGTGATTACCCTGATCCAGAAACGCCCGTGGGTGTTTAAGCTGGATGGGCAGGATAAGTTGCGTTTTGAGGTGGAATTGCCGACGGTGGAGGAGCGGGAGGAATGGGTGGTTGGGTTGATGGGGGAGATTGGGTAG
PROTEIN sequence
Length: 141
VELGVPALIPDDYLPDVHSRLILYKRIASAVSQAALDELRVEMIDRFGLLPKQTKTLFSVTRLKLIAQGLGIRKLDVNAKGGRMIFEDKPAIDPMKVITLIQKRPWVFKLDGQDKLRFEVELPTVEEREEWVVGLMGEIG*