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ar4r2_scaffold_16654_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 3..533

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 177.0
  • Bit_score: 210
  • Evalue 1.20e-51
tRNA pseudouridine synthase B n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRP1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 177.0
  • Bit_score: 210
  • Evalue 8.30e-52
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 175.0
  • Bit_score: 151
  • Evalue 1.30e-34

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
GCCTTAAAAAAAGCCGGACAACCCTTGTATAAATTGGCGCGTCAAGGCATCGAAGTAGAGCGTGAATCCCGCCAGGTTACTATCCATGAATTAACCTTGTTAGAACGCACCGCAACGACTTTAAATTTCGCAGTCACTTGTACCAAAGGCACGTACATTCGCACCTTGGTGGAAGATATTGGTGAAGCCTTGGGTTGTGGAGCTTATGTTTCAGCGTTACGGCGTGAACGGGTTGATCCGTTTGGCACTTACGTCATGCACACCTTAGAAAGCTTGCGTGCGGTAGCGGCAGAGCAGGGTTTGGCAGCTCTGGATGCGTTGTTATTACCTATTGATGCAGCACTGCCAAATGTTACCGCATTGACACTGAACGATGAACAAGTGCTGCATATTCGTCAGGGAAAGCGTTTTGCGGTTGCGATAACGGACGATTGTGAATTGTTGCGTTTGTATGATGGTGCTGGATTATTCATCGGTTTAGGTAGTGTTGTGCAAGGTAATTTAAGCGCACGCCGCCTTTTGTCGTATTGA
PROTEIN sequence
Length: 177
ALKKAGQPLYKLARQGIEVERESRQVTIHELTLLERTATTLNFAVTCTKGTYIRTLVEDIGEALGCGAYVSALRRERVDPFGTYVMHTLESLRAVAAEQGLAALDALLLPIDAALPNVTALTLNDEQVLHIRQGKRFAVAITDDCELLRLYDGAGLFIGLGSVVQGNLSARRLLSY*