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ar4r2_scaffold_28132_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(1..1575)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.4
  • Coverage: 525.0
  • Bit_score: 831
  • Evalue 4.20e-238
Ribonuclease R n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQJ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 525.0
  • Bit_score: 831
  • Evalue 3.00e-238
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 526.0
  • Bit_score: 700
  • Evalue 2.20e-199

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Taxonomy

Thiothrix nivea → Thiothrix → Thiotrichales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
ATGCACGGCGACCGTGCGTTAGTGAGTGTACGCGGGCTTGACCCCAAAGGGCGGCGTGAAGGTGCGCTGGTTGAAGTCTTAGAACGCGGCACAGTACAAGTGGTCGGGCGTTACTTTGTGGAAGGTGGCATTGGTTTTGTTGCACCGGACAATGCCCGCTTAAACCAGGATATTTTGATTCCAAGTGATGCTGCCGGTGGTGCAGTGCATGGGCAGATCGTGGTTGCCAGCATCGTGGAACAGCCTTCCAAACGCGCTCAACCCAGCGGCAAAATTGTCGAAGTATTGGGTGACCACATGGCTCCCGGCATGGAAATCAATGTCGCGATGCGCAGCCATGAACTGCCATTCGAGTGGCCGGATGAAGTCAGTGAGGAAGCCGACCGTTTTAGCGTAAATGTCGCGGAAACTGATGCTGCGAACCGTTGGGATTTACGCCAATTACCGTTAGTAACCATTGACGGCGAAGATTCCAAAGACTTTGACGACGCAGTTTATTGCGAACGCGAAGGCAATAACTGGCGTTTATTGGTAGCCATTGCGGACGTATCACATTATGTGCGCCCCGGTATGGCGATTGATCGTGAAGCACGCGAACGTGGTACATCGGTGTATTTCCCCGGCAAAGTGATTCCGATGTTGCCGGAAATTCTTTCCAACGGTTTGTGCTCACTGAATCCGCAAGTTGATCGCTTGTGCATGGTGTGTGAAATTCGCATTGGCGCACGCGGTAAGTTACTCAGCTATCAATTCGCGGAAGGCATTATGCATTCGGCGGCACGCTTGACCTACACCAAAGTTGCCGACATGGTGGTGCAGCGTAATCCGACTACCCGTGCGGATTATCCGGCGGCAGTGCTCGACTGCGTGGATGAAGCCTACGCTTTGTACAAAGTATTGCGTAAAGCGCGTGATAAACGCGGCGCGATTGACTTTGAAACGGCTGAAACCCGCATTGTGTTTGATGCTGATCGTAAAATCGAAGCGATTGTTCCCACAGAACGCAATGACGCTCACAAATTGATCGAAGAATGTATGATTCTCGCCAATGTGTGCGCAGCAAAATTCCTCAGCAAGCATAAAATCCCTGCTTTACACCGGGTGCATGATGGCCCGACTGTGGAAAAACTGGTGGATTTACGCCAATTCCTCGCAGGCGTTGGTTTGAACTTGGAAGGCGGTGACGAACCTGATCCAGCGGATTACGCGGAATTGATGGATGAATTGCACGACCGTCCCGACCGTCACATGATTCAAACCGTGTTACTGCGCTCCCTGTCGCAAGCGGTTTACAGCCCTGCGGCTACCGGGCATTTCGGCTTGGCGCATTCGTATTACGCGCATTTCACCTCACCTATTCGGCGTTACCCTGATTTATTGGTACATCGCGCCATTCGTCACGTAGTACGTGGTGGTACAGCCAAAGATTTTGGTTACAGCTTTAAAGATATGATGGGCTTGGGCGAACATTGCTCTATGACCGAACGCCGCGCCGACGATGCGACACGCAATGTCACCGCATGGCTGAAATGTGAATATATGCAAGAGCATGTCGGGGAAAATTTCACGGGTATT
PROTEIN sequence
Length: 525
MHGDRALVSVRGLDPKGRREGALVEVLERGTVQVVGRYFVEGGIGFVAPDNARLNQDILIPSDAAGGAVHGQIVVASIVEQPSKRAQPSGKIVEVLGDHMAPGMEINVAMRSHELPFEWPDEVSEEADRFSVNVAETDAANRWDLRQLPLVTIDGEDSKDFDDAVYCEREGNNWRLLVAIADVSHYVRPGMAIDREARERGTSVYFPGKVIPMLPEILSNGLCSLNPQVDRLCMVCEIRIGARGKLLSYQFAEGIMHSAARLTYTKVADMVVQRNPTTRADYPAAVLDCVDEAYALYKVLRKARDKRGAIDFETAETRIVFDADRKIEAIVPTERNDAHKLIEECMILANVCAAKFLSKHKIPALHRVHDGPTVEKLVDLRQFLAGVGLNLEGGDEPDPADYAELMDELHDRPDRHMIQTVLLRSLSQAVYSPAATGHFGLAHSYYAHFTSPIRRYPDLLVHRAIRHVVRGGTAKDFGYSFKDMMGLGEHCSMTERRADDATRNVTAWLKCEYMQEHVGENFTGI