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ar4r2_scaffold_16032_1

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: comp(1..222)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=637905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 /; DSS12).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 53.0
  • Bit_score: 71
  • Evalue 4.70e-10
hypothetical protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00037914F9 similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 44.0
  • Bit_score: 72
  • Evalue 1.50e-10
rluC; ribosomal large subunit pseudouridine synthase C similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 53.0
  • Bit_score: 71
  • Evalue 9.40e-11

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Taxonomy

Shewanella violacea → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGCTTTGCCGATTACATCCAGCACAAACAGCTATCACTATACCAATGAATCAAGATAACAGCAATACCTCTAGCCCTTTGGTGGGCGTGCAATACTTAACTGTAGCGGAGGAAGATCAAGGACAGCGTTTAGACAATTATTTACTGTCGCGTTTAAAAGGTGTGCCTAAGACGCATATTTATAAATTAATTCGTAAAGCCGAAATTCGCGTCAATAAAAAG
PROTEIN sequence
Length: 74
MLCRLHPAQTAITIPMNQDNSNTSSPLVGVQYLTVAEEDQGQRLDNYLLSRLKGVPKTHIYKLIRKAEIRVNKK