ggKbase home page

ar4r2_scaffold_8556_2

Organism: ALUMROCK_MS4_Thiotrichales-related_46_269_curated

near complete RP 47 / 55 MC: 3 BSCG 49 / 51 MC: 5 ASCG 11 / 38 MC: 2
Location: 832..1452

Top 3 Functional Annotations

Value Algorithm Source
rsmD; 16S rRNA methyltransferase (EC:2.1.1.171) similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 204.0
  • Bit_score: 171
  • Evalue 1.40e-40
Ribosomal RNA small subunit methyltransferase D {ECO:0000256|PIRNR:PIRNR004553}; EC=2.1.1.171 {ECO:0000256|PIRNR:PIRNR004553};; TaxID=29485 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia rohdei.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 204.0
  • Bit_score: 171
  • Evalue 7.00e-40
Putative methyltransferase n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4L0Q8_SIMAS similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 192.0
  • Bit_score: 171
  • Evalue 5.00e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Yersinia rohdei → Yersinia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 621
ATGTCGGTACAGCCTAAGTTGAAAGCCAAGTCTGTAACGGCGAAAACAGCGGGTAAAGTGCGCCTCATTGCGGGCCAGTGGCGTGGTCGCATCTTGCCAGTGGTTGGTGCAGAGGGCTTGCGTCCGACGGGAGACAGGGTGCGTGAAACGCTGTTTAATTGGTTGCAGTTTGAATGGGAGGGGGCGCGTTGGCTGGATTTGTTCGCAGGTTCGGGCGCTTTGTCCTTCGAGGCCTTGTCTCGTCATGCCAGTCAGGTGGTGATGTTGGAGCGCAATCCGCAAGCAGTGGTTCAATTACAGCAAAATAAAGCCTTGCTTAATGCGGTTAATGCCGAGATTATTCAAACCGATAGTTTCCAATGGTTGGCGCAACCACCGTCCGATTTAACGCCGTTTGATGGGGTGTTTTGTGATCCGCCATTTGCCGATGAACGCGTTGAGCAACTCATTAATCAGCTCGTATCCGCACAGTTGATTAAGCCAAATGGTTGGTTGTATCTCGAACAACCTAAGGAACGTGTGTTATGCTTGCCTGATTTTGAACCCTATCGTCAACAAACCACGGGAGCGGTTAGCTTTGGTTTGTGGCGCTTGAAATCTGAGCGTGGCATTAGTGAGTAA
PROTEIN sequence
Length: 207
MSVQPKLKAKSVTAKTAGKVRLIAGQWRGRILPVVGAEGLRPTGDRVRETLFNWLQFEWEGARWLDLFAGSGALSFEALSRHASQVVMLERNPQAVVQLQQNKALLNAVNAEIIQTDSFQWLAQPPSDLTPFDGVFCDPPFADERVEQLINQLVSAQLIKPNGWLYLEQPKERVLCLPDFEPYRQQTTGAVSFGLWRLKSERGISE*