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ar4r2_scaffold_1470_23

Organism: ALUMROCK_MS4_BD1-5_24_33_curated

partial RP 47 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 4 / 38 MC: 2
Location: 17743..18837

Top 3 Functional Annotations

Value Algorithm Source
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 363.0
  • Bit_score: 263
  • Evalue 2.40e-67
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54) similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 366.0
  • Bit_score: 261
  • Evalue 2.40e-67
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Dorea sp. 5-2 RepID=R9NCV0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 363.0
  • Bit_score: 263
  • Evalue 1.70e-67

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Notes

early in Phe, Tyr, Trp pathway Jill Banfield (11/8/16)

Taxonomy

Dorea sp. 5-2 → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1095
ATGTCTAAAAAAATAGTTTGAAAATTACCAAAAGTTAGTGAAATAAAAAATAAATTTCCACTAAGTGAAAAAGCTAGTGAAAATGTTTTACAAAATATTGAAGAATTAAAAAATATTTTTTCTGGGTTTGATTCTAGAAAAATTTTAATTATAGGTCCTTGTAGTGCAGATTTTGAAGACAGTCTTTATGAATATTGAGAATTTTTATCAGAATTGCAAGAAAAAGTGAAAGATAAAATTAAAATAGTTTTTAGATTTTATACGGGAAAACCTAGAACTGTTTGAGGTTGGAAATGACTTAGTTATTCTGTTCCTTGAGAAAATCCAGATTTATTGAAGTGAATGGAAAATACAAGAAGAATTGCAATAAATTTAATAGAAAAATTTTGACTTGCTTTGGCTGAAGAAATGCTTCATCCTGAAATGAGTGATTATTTTGATGATATTTTTTCTTATGAAGTTGTTTGAGCAAGAAGTGTAGAAAATCAATATCATAGGGAAGTTATGAGCTGAGTTTCTTGTCCTGTTTGATTAAAAAATCATACTCTTTGAGATTTGCAATTTATGGTAAATGCAATTGCAGCTGCAAATAATCCAAGCTCTTATGTAAGTGCTTTGTGAGAAGTTTATGAAACAACTTGAAATGAATTTGCTCATTGAGTTCATAGATGAGCTGAAAGATGAGGAACAAATTATGATTTGGAAGCAATTAAGTTGAGTTATGAATTAATGGAAAAAAGAAATGTGAAAAATAAATGAATTGTTATTGATTGTAATCACGATAATTCAAAGAAAAACCCATTTAAACAAATTGAAATTATGAGTGAAGTTATGGAAAGTATAAAGGCAATTTCACAAAATCCCCCTGCCGTTGGCATCCCCCTTATTAAGGGGGACAATTATGAGAACAAAGATTTTTCTTTGAAACATCTTTTTGATTTCGTAAAATGATTTATGGTTGAAAGTTATTTGTATGATTGAAGACAAGAATTTGATAGTATTGAAACAGTAAAAAAAGGTTTGAGTTTGACAGATCCTTGCATTTGAAAAGAGGGAACTAGAGAGTTTGTTGAAAAAATGTATAAATATTTATAG
PROTEIN sequence
Length: 365
MSKKIVGKLPKVSEIKNKFPLSEKASENVLQNIEELKNIFSGFDSRKILIIGPCSADFEDSLYEYGEFLSELQEKVKDKIKIVFRFYTGKPRTVGGWKGLSYSVPGENPDLLKGMENTRRIAINLIEKFGLALAEEMLHPEMSDYFDDIFSYEVVGARSVENQYHREVMSGVSCPVGLKNHTLGDLQFMVNAIAAANNPSSYVSALGEVYETTGNEFAHGVHRGAERGGTNYDLEAIKLSYELMEKRNVKNKGIVIDCNHDNSKKNPFKQIEIMSEVMESIKAISQNPPAVGIPLIKGDNYENKDFSLKHLFDFVKGFMVESYLYDGRQEFDSIETVKKGLSLTDPCIGKEGTREFVEKMYKYL*