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ar4r2_scaffold_1155_20

Organism: ALUMROCK_MS4_BD1-5_24_33_curated

partial RP 47 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 4 / 38 MC: 2
Location: 14110..15012

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthetase (EC:2.5.1.1 2.5.1.10 2.5.1.29) similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 298.0
  • Bit_score: 176
  • Evalue 8.40e-42
Geranylgeranyl pyrophosphate synthetase, (Ggppsynthetase) (Ggps) {ECO:0000313|EMBL:ACI20915.1}; EC=2.5.1.1 {ECO:0000313|EMBL:ACI20915.1};; EC=2.5.1.10 {ECO:0000313|EMBL:ACI20915.1};; EC=2.5.1.29 {ECO:0000313|EMBL:ACI20915.1};; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 /; YP87).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 298.0
  • Bit_score: 176
  • Evalue 4.20e-41
Geranylgeranyl pyrophosphate synthetase, (Ggppsynthetase) (Ggps) n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHY7_THEYD similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 298.0
  • Bit_score: 176
  • Evalue 3.00e-41

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Notes

Farnesyl-PP to Geranylgeranyl-PP, central in isoprenoid pathway Jill Banfield (11/8/16)

Taxonomy

Thermodesulfovibrio yellowstonii → Thermodesulfovibrio → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 903
ATGCTACTTCCATCTTGGTATTCTAAATACAAAACTTTTATAGAATCAGAAATAGAAATATTTCTTGATTCTTATTTTGAAAAAAGTAAAAAAAATTCTACTCCTTTAAAACACTTTGAAGAAGTTATTAGATATTCAGTTAAATGATGAAAAAAAATTAGAGCAATTTTAGCTTTAGAATCATATTTAGCTTTAGCAAAAAAAAGCTTAAAAGATATTAAAAGTTCTGATGATATAGTAAAAATTTGCATTGCTTTGGAATTTTCTCATTCTTGGACTTTGGTGCAAGATGATTTACCTTGTATGGATAATGACACTTTGAGAAGATGAAATCCAACCGTTTGGTCTAAATTTTGAGAATATCAGGCAGTTTTAGCAAGTGATATTTTGCAAACTGTTACTTATGAAATTTTATCAAATTTAGAAAATAAAGATTTAGCATTAAAAAGTATAAATATATTATCTAAGTCAATGTGATTTTATTGAGTGGGTTGATGACAATTAGAAGATTTATATTTTGAGGAAAATCCAGCAGAAACGACTCAAGAAATTTTGGTTTGAATTCATAGAAAAAAAACAGCAAAATTAATAAAAGCTTCTGTTAAATTAGGAATTATTGCTTCATGAAAAGAAAAATATTTGAAACCTTTTTCTTTATTTTGAGAGAAATTATGACTTGCTTATCAAATAAAAGATGATATTCTTGATGTTGAATGAGATTCTGAAACTACTTGAAAAAGTGTTTGAAGCTGAGAACAAAAATGATTTGTATTTTTTGTTTGACTTGAAAAATCAAAAGAAACTCTTAAAGGTTTGCTTTCAAATTGCAAAAAAATAGCTAAGAAAATGAAATCTTCAAAGCTAGAATTTATTACAGATTATGTTTGAGGAAGAGTTGGGTAA
PROTEIN sequence
Length: 301
MLLPSWYSKYKTFIESEIEIFLDSYFEKSKKNSTPLKHFEEVIRYSVKGGKKIRAILALESYLALAKKSLKDIKSSDDIVKICIALEFSHSWTLVQDDLPCMDNDTLRRGNPTVWSKFGEYQAVLASDILQTVTYEILSNLENKDLALKSINILSKSMGFYGVGGGQLEDLYFEENPAETTQEILVGIHRKKTAKLIKASVKLGIIASGKEKYLKPFSLFGEKLGLAYQIKDDILDVEGDSETTGKSVGSGEQKGFVFFVGLEKSKETLKGLLSNCKKIAKKMKSSKLEFITDYVGGRVG*