ggKbase home page

ar4r2_scaffold_588_27

Organism: ALUMROCK_MS4_BD1-5_24_33_curated

partial RP 47 / 55 MC: 2 BSCG 38 / 51 MC: 2 ASCG 4 / 38 MC: 2
Location: comp(25347..26066)

Top 3 Functional Annotations

Value Algorithm Source
trpC; indole-3-glycerol-phosphate synthase (EC:4.1.1.48) similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 254.0
  • Bit_score: 122
  • Evalue 8.80e-26
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=123214 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Persephonella.;" source="Persephonella marina (strain DSM 14350 / EX-H1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 254.0
  • Bit_score: 122
  • Evalue 4.40e-25
Indole-3-glycerol phosphate synthase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QPX6_PERMH similarity UNIREF
DB: UNIREF100
  • Identity: 33.5
  • Coverage: 254.0
  • Bit_score: 122
  • Evalue 3.10e-25

Lists

This feature is not on any list.

Notes

Trp synthesis prior to 4.2.1.20 Jill Banfield (11/8/16)

Taxonomy

Persephonella marina → Persephonella → Aquificales → Aquificae → Aquificae → Bacteria

Sequences

DNA sequence
Length: 720
ATGAAAATTTTAGAAAAGATTTTGTTAAGTAAAAAAGAAGAATTAAAAAATATTAAATCAAACTGAGATTTATTTAAAAAAGTTTTTGTTAAAAAAGAGGCAAATATTATTTGAGAAATAAAGTTAGCTTCTCCAAGCTGAAATATTCCAAAAAATTCTTTTGCAAATTTAGAAAAAATTACTGAATTTTATTGAAAAAATAGTCAAATAAAAGCTGTTTCAAACTTGATAGATAAAAAATTTTTTTCTTGAGATATAAATATTTGAACTAATTTTAAGCAAAAGTATAATAAACTGATTTTTTTCAAAGAATTTGTGATCTCAAAAAAACAAATTGATTGAGCAAGTTATTTTGGATATGATTCTTTACTTTTAATAAAAAGAATTTTAACTAGAAATGAACTTATCAACTTTATCTTTTATTCAAAATCAAAAAATATTTTTCCAATTGTTGAAGTTGATAATGAAAAAGATTTTGAAGAAATTTTAGAATTATCACAAGATTTAGAGTTTGCAGTAGCTTTGAATTCAAGAAATTTAGATACTTTAGAAATAAATAAAAACTTTCATTTTGAAATATATGAAAAATTTAAAGATAAGTTAGAAGATAAAATTATTTTTGCTTTTTCTTGAATAAACTCCGAAGAAGAACAAAAATCATATATTTGAAAGTTTAATTGAATACTTATTTGAAGTTATTTTATGAAAAAATTATGTTAG
PROTEIN sequence
Length: 240
MKILEKILLSKKEELKNIKSNGDLFKKVFVKKEANIIGEIKLASPSGNIPKNSFANLEKITEFYGKNSQIKAVSNLIDKKFFSGDINIGTNFKQKYNKLIFFKEFVISKKQIDGASYFGYDSLLLIKRILTRNELINFIFYSKSKNIFPIVEVDNEKDFEEILELSQDLEFAVALNSRNLDTLEINKNFHFEIYEKFKDKLEDKIIFAFSGINSEEEQKSYIGKFNGILIGSYFMKKLC*