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ar4r2_scaffold_2801_12

Organism: ALUMROCK_MS4_BD1-5_24_44_curated

partial RP 47 / 55 MC: 2 BSCG 34 / 51 MC: 1 ASCG 0 / 38
Location: 7373..8722

Top 3 Functional Annotations

Value Algorithm Source
cth:Cthe_0895 RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor id=124054 bin=ACD78 species=ACD78 genus=ACD78 taxon_order=ACD78 taxon_class=ACD78 phylum=BD1-5 tax=ACD78 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5 similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 444.0
  • Bit_score: 605
  • Evalue 3.90e-170
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 444.0
  • Bit_score: 605
  • Evalue 5.40e-170
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 349.0
  • Bit_score: 381
  • Evalue 2.00e-103
  • rbh

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Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 1350
ATGGTAAAACAAGATAAAGAAAATTTGAAAAATTGAAATCAGATAGAAGAAGTTGATTTAGACTCAATTGATATAGACCAAAATGAATTTGATTATAATGACTCTGAATTAGATGAATCTGAGTCTTTTTATGATTTTGATGAAGAAGATGAAGATCTTGAATTCATATTAAGTAAGAAAAAAGAGAAATGATGAAAAAAAATTCCTGTTGATAGAGATGAAGATAAAAGAAGAATCTGAAAATGATTACAAAAATTTATTGATGTAACTATTGATCAAAAATTACTTGATTGAATGCCTCTTGAAATCCAAGAATTGATGAAAAAATGAAAATATGAGTGAAAAATTACTCAAGATGAAATAATGGCAGCAATCCCTCACGCTGAAGATGACATTGATTTACTTGATGAAATTTATACTAGATTTTTACAGTTAAAAATTGAAATTGTTGATAATTTAGATAAAGATACTCTATTTGACTTAGAAAAAAATCCAAAATTAGATAAATCTGCTATTTCATTATCTGAGATTAGTGATGACTCTATAAGAATGTATTTAAATGAAATATGAAGAGTTCCGTTATTGAGTCAAGATGAAGAAATTGAATTATGAAAGAGAGTTATTGCTTGAGATCAGGAAGCCAGAAAAAGACTTGCTGCCGCAAACTTAAGGCTTGTTGTATCAATTGCTAAAAAATATATGTGAAGAGGTTTATGACTTCTTGATTTGATTCAAGAATGAAATGTTTGACTTTTTAGAGCTGTTGATAAATTTGATCCTAGTAAATGATTTAAATTCTCAACTTATGCTACATGGTGGATTAGGCAATGAGTAACTAGATCAATTGCTGATCAAGCCAGAACAATAAGAGTCCCAGTTCATATGATTGAAACTATAAATAAATTTACACATACTTTTAGAAGACTTACTCAAGAATTAACTCGTGAGCCACTTATGGAAGAACTTGCGACAGAACTTGATATGGATATCAGAAAAGTAAGACAAATAATGAGAATAAGTCAAGATATACTTAGCATAGATTCACCAGTTTGATCTGAAGAAGATACTTCCCTATGAGATTTTATTGAGGATGATAAAAATCCTTCTCCTGATGAACAAACAAATATGAAATTATTAAAGGAAAATCTATATGAGATGCTTGATTTTTTAACTCAGAGAGAAAAAAAGATTATTATTATGAGATTTGGTTTAGATGGTTGAGATGTTCATACTCTTGAAGAAGTTTGAAAAGAATTTTGAGTTACTAGAGAAAGAATTAGACAAATAGAAAGTAAAACTTTAGAAAAACTTAAAGAACACCCTAATGCTGATAAAATAAAATTTTTTTAG
PROTEIN sequence
Length: 450
MVKQDKENLKNGNQIEEVDLDSIDIDQNEFDYNDSELDESESFYDFDEEDEDLEFILSKKKEKGGKKIPVDRDEDKRRIGKGLQKFIDVTIDQKLLDGMPLEIQELMKKGKYEGKITQDEIMAAIPHAEDDIDLLDEIYTRFLQLKIEIVDNLDKDTLFDLEKNPKLDKSAISLSEISDDSIRMYLNEIGRVPLLSQDEEIELGKRVIAGDQEARKRLAAANLRLVVSIAKKYMGRGLGLLDLIQEGNVGLFRAVDKFDPSKGFKFSTYATWWIRQGVTRSIADQARTIRVPVHMIETINKFTHTFRRLTQELTREPLMEELATELDMDIRKVRQIMRISQDILSIDSPVGSEEDTSLGDFIEDDKNPSPDEQTNMKLLKENLYEMLDFLTQREKKIIIMRFGLDGGDVHTLEEVGKEFGVTRERIRQIESKTLEKLKEHPNADKIKFF*