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Candidatus_Parvarchaeum_acidiphilum_ARMAN-4_baker2010

amd_refseq_Candidatus_Parvarchaeum_acidiphilum_34_1

In projects: amd_refseq | AMD_2019 | alphabet_plasma | archaea_ggkbase

Consensus taxonomy: Candidatus Parvarchaeum acidiphilum → Candidatus Parvarchaeum → Parvarchaeota → Archaea

Metagenomic Context

Properties

Avg. coverage: 1.00 Longest contig: 89.51 Kbp Bin length: 791.49 Kbp GC content: 34.04 %

Contigs count: 44 Features count: 958 rRNAs count: 2 tRNAs count: 39

Genome completeness

near complete RP 24 / 55 MC: 3 BSCG 15 / 51 MC: 1 ASCG 34 / 38 MC: 5

Description

Candidatus Parvarchaeum acidiphilum ARMAN-4 genomic scaffold Scf_ARM4contig_4798, whole genome shotgun sequence

Displaying 44 items

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
GG730040	116	89508 bp	33.47	1.00	0.00
GG730044	79	64642 bp	35.09	1.00	0.00
GG730049	76	62191 bp	32.81	1.00	0.00
GG730046	71	48353 bp	33.90	1.00	0.00
GG730042	58	51950 bp	34.46	1.00	0.00
GG730039	53	47871 bp	31.95	1.00	0.00
GG730041	52	50347 bp	35.50	1.00	0.00
GG730045	46	36500 bp	32.20	1.00	0.00
GG730050	36	23807 bp	32.97	1.00	0.00
GG730075	34	24859 bp	33.22	1.00	0.00
GG730077	31	41471 bp	35.55	1.00	0.00
GG730076	30	24854 bp	34.29	1.00	0.00
GG730074	27	19618 bp	32.17	1.00	0.00
GG730038	26	34248 bp	33.49	1.00	0.00
GG730043	23	17935 bp	35.13	1.00	0.00
GG730047	23	20649 bp	34.96	1.00	0.00
GG730078	17	10852 bp	31.70	1.00	0.00
GG730073	15	11973 bp	36.68	1.00	0.00
GG730070	14	7885 bp	35.38	1.00	0.00
GG730048	13	13102 bp	36.86	1.00	0.00
GG730051	13	10397 bp	32.44	1.00	0.00
GG730072	12	9518 bp	33.35	1.00	0.00
GG730062	8	4391 bp	33.50	1.00	0.00
GG730066	7	3979 bp	35.44	1.00	0.00
GG730068	6	3851 bp	36.77	1.00	0.00
GG730071	6	6942 bp	35.38	1.00	0.00
GG730054	5	2388 bp	35.89	1.00	0.00
GG730058	5	2844 bp	36.46	1.00	0.00
GG730061	5	4657 bp	36.98	1.00	0.00
GG730067	5	2899 bp	30.53	1.00	0.00
GG730082	5	1400 bp	36.00	1.00	0.00
GG730052	4	1331 bp	35.31	1.00	0.00
GG730055	4	2575 bp	37.63	1.00	0.00
GG730057	4	1959 bp	36.29	1.00	0.00
GG730059	4	4444 bp	33.48	1.00	0.00
GG730060	4	3324 bp	28.61	1.00	0.00
GG730065	4	3504 bp	35.33	1.00	0.00
GG730064	4	3448 bp	32.95	1.00	0.00
GG730081	3	4057 bp	42.52	1.00	0.00
GG730063	3	3034 bp	35.33	1.00	0.00
GG730079	2	2736 bp	35.42	1.00	0.00
GG730053	2	1707 bp	39.48	1.00	0.00
GG730080	2	1976 bp	39.42	1.00	0.00
GG730056	1	1512 bp	38.62	1.00	0.00

Displaying 44 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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