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SCNPILOT_CONT_500_P_Acidobacteria_60_9_7

SCNPILOT_CONT_500_P_Acidobacteriales_59_10
In projects: SCNPILOT_CONT_500_P  |  Acidobacteria_All

Consensus taxonomy: Acidobacteriales  →  Acidobacteriia  →  Acidobacteria  →  Bacteria

Taxonomy override: Acidobacteria

Metagenomic Context

Parent: SCNpilot_cont_500_p_UNK

Properties

Avg. coverage: 10.32 Longest contig: 606.78 Kbp Bin length: 5.00 Mbp GC content: 58.91 %
Contigs count: 70 Features count: 4215 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 51 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 12 / 38

Description

don't curate

Displaying items 1-50 of 70 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
scnpilot_cont_500_p_scaffold_2
Order: Acidobacteriales (62.17%)
497 606781 bp 59.09 10.39 88.75
scnpilot_cont_500_p_scaffold_14
Genus: Granulicella (56.08%)
469 550969 bp 59.59 9.59 88.61
scnpilot_cont_500_p_scaffold_45
Order: Acidobacteriales (62.35%)
409 499583 bp 61.95 10.89 85.44
scnpilot_cont_500_p_scaffold_9
Order: Acidobacteriales (75.35%)
357 426725 bp 58.91 9.61 90.73
scnpilot_cont_500_p_scaffold_11
Genus: Granulicella (51.8%)
334 387771 bp 59.83 10.84 88.29
scnpilot_cont_500_p_scaffold_24
Genus: Granulicella (64.49%)
245 268970 bp 59.73 9.93 89.16
scnpilot_cont_500_p_scaffold_21
Order: Acidobacteriales (60.42%)
240 293587 bp 59.15 10.41 87.81
scnpilot_cont_500_p_scaffold_23
Domain: Bacteria (77%)
213 272559 bp 53.75 11.53 89.34
scnpilot_cont_500_p_scaffold_30
Genus: Granulicella (52.5%)
200 240339 bp 60.06 9.79 89.75
scnpilot_cont_500_p_scaffold_29
Phylum: Acidobacteria (54.86%)
175 243732 bp 57.78 10.60 87.91
scnpilot_cont_500_p_scaffold_50
Phylum: Acidobacteria (54.07%)
172 193272 bp 55.27 10.62 89.20
scnpilot_cont_500_p_scaffold_65
Order: Acidobacteriales (53.25%)
169 191291 bp 57.30 9.95 87.73
scnpilot_cont_500_p_scaffold_53
Genus: Granulicella (50.69%)
144 179678 bp 61.47 10.69 84.41
scnpilot_cont_500_p_scaffold_58
Order: Acidobacteriales (58.46%)
130 171683 bp 56.50 10.40 90.26
scnpilot_cont_500_p_scaffold_78
Order: Acidobacteriales (72.13%)
122 135856 bp 58.55 10.54 89.33
scnpilot_cont_500_p_scaffold_106
Domain: Bacteria (50%)
100 107624 bp 59.04 10.66 87.09
scnpilot_cont_500_p_scaffold_155
Genus: Granulicella (52.08%)
96 100558 bp 57.38 10.23 88.73
scnpilot_cont_500_p_scaffold_1847
Domain: Bacteria (64.71%)
17 16096 bp 55.62 21.11 92.84
scnpilot_cont_500_p_scaffold_1357
Domain: Bacteria (68.75%)
16 19994 bp 56.08 11.06 88.50
scnpilot_cont_500_p_scaffold_2204
Phylum: Proteobacteria (50%)
12 16849 bp 56.89 12.85 87.89
scnpilot_cont_500_p_scaffold_17980
Genus: Nitrosospira (60%)
5 4316 bp 60.13 20.02 85.98
scnpilot_cont_500_p_scaffold_38480
Domain: Bacteria (60%)
5 1788 bp 64.32 11.49 76.68
scnpilot_cont_500_p_scaffold_53936 4 1793 bp 58.84 9.45 75.13
scnpilot_cont_500_p_scaffold_19836
Species: uncultured bacterium (50%)
4 2686 bp 58.97 9.10 49.93
scnpilot_cont_500_p_scaffold_27876
Domain: Bacteria (50%)
4 2182 bp 62.74 8.66 79.88
scnpilot_cont_500_p_scaffold_11620
Species: RBG_16_RIF_CHLX_72_14_curated (50%)
4 3835 bp 61.41 4.54 96.22
scnpilot_cont_500_p_scaffold_23084
Domain: Bacteria (66.67%)
3 2447 bp 62.65 8.95 78.22
scnpilot_cont_500_p_scaffold_49859
Species: Belliella baltica (66.67%)
3 1515 bp 64.22 2.97 99.21
scnpilot_cont_500_p_scaffold_42301
Species: Terriglobus saanensis (50%)
2 1683 bp 54.49 2.67 61.50
scnpilot_cont_500_p_scaffold_64185
Species: Terriglobus saanensis (50%)
2 1288 bp 61.65 3.73 69.41
scnpilot_cont_500_p_scaffold_29140
Species: Inquilinus limosus (50%)
2 2124 bp 63.84 3.25 88.56
scnpilot_cont_500_p_scaffold_53119
Species: uncultured bacterium (50%)
2 1456 bp 60.92 9.89 93.96
scnpilot_cont_500_p_scaffold_88193
Species: Legionella fallonii (50%)
2 1042 bp 41.84 3.17 84.93
scnpilot_cont_500_p_scaffold_68875
Species: RBG_13_Chloroflexi_57_8_curated (50%)
2 1230 bp 59.67 2.44 76.34
scnpilot_cont_500_p_scaffold_57013
Species: Marinobacterium sp. AK27 (50%)
2 1390 bp 60.22 9.17 69.50
scnpilot_cont_500_p_scaffold_42842
Species: Chloracidobacterium thermophilum (50%)
2 1670 bp 68.38 3.68 94.49
scnpilot_cont_500_p_scaffold_66839
Species: Candidatus Solibacter usitatus (50%)
2 1254 bp 60.53 4.31 83.97
scnpilot_cont_500_p_scaffold_79075
Species: Candidatus Solibacter usitatus (50%)
2 1121 bp 63.07 2.68 81.62
scnpilot_cont_500_p_scaffold_80519
Species: Castellaniella defragrans (50%)
2 1108 bp 48.56 3.52 69.86
scnpilot_cont_500_p_scaffold_41274
Species: Sphingomonas sp. SRS2 (50%)
2 1710 bp 68.48 3.25 95.96
scnpilot_cont_500_p_scaffold_58460
Species: Acidobacterium capsulatum (50%)
2 1367 bp 61.81 2.85 100.29
scnpilot_cont_500_p_scaffold_36924
Species: Granulicella mallensis (50%)
2 1837 bp 64.02 2.20 89.17
scnpilot_cont_500_p_scaffold_34460
Species: Candidatus Solibacter usitatus (50%)
2 1916 bp 58.66 9.16 75.47
scnpilot_cont_500_p_scaffold_27106
Species: Candidatus Koribacter versatilis (50%)
2 2218 bp 63.62 2.77 72.09
scnpilot_cont_500_p_scaffold_44320
Species: Mesorhizobium plurifarium (50%)
2 1635 bp 55.29 2.57 90.28
scnpilot_cont_500_p_scaffold_87930
Species: Granulicella mallensis (50%)
2 1044 bp 56.51 1.00 98.28
scnpilot_cont_500_p_scaffold_62479
Species: RBG_13_Bacteroidetes_42_15_curated (50%)
2 1311 bp 60.18 6.06 82.61
scnpilot_cont_500_p_scaffold_80389
Species: Candidatus Solibacter usitatus (50%)
2 1109 bp 62.22 1.35 95.22
scnpilot_cont_500_p_scaffold_48108
Species: Acidobacterium capsulatum (50%)
2 1550 bp 62.06 4.35 77.42
scnpilot_cont_500_p_scaffold_65525
Species: RHI_Legionellales_37_14 (50%)
2 1270 bp 46.22 5.67 76.30
Displaying items 1-50 of 70 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.