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FFV18_Bp1_scaffold_58686_3

Organism: FFV18_Bp1_Acidobacteria_54_23

near complete RP 42 / 55 MC: 2 BSCG 48 / 51 ASCG 10 / 38 MC: 1
Location: comp(1078..1725)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12557003 bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 191.0
  • Bit_score: 155
  • Evalue 5.10e-35
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 206.0
  • Bit_score: 158
  • Evalue 6.40e-36

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Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGTACGGACATGAGATTACACTGGCCGAAAACAGCGGCAACGCAAAACACGACGACGTCGATATCTCGTTAGTTGCCCGCTTCCAGGCTGGGGATACAACGGCCTTCGAAGATATCTTCACACTGTATAAGGACACGGTTTTTCGATTAGCCTTTCGACTGCTCGGCGACCGCGAAGAAGCTCTGGATCTGTCGCAGGACGTATTCCTAACACTCTATAAAGAACTCCGGCGATTTCGTCGCTCTTCCCGATTCAAGACCTGGATTTACCGAATTGTGGTAAACCGAGCCCTCAATCGGCTGCGCTTATGGAAGCGGCAACGGCGCCACCAGACGATTTCTTTGGATGCCTTGCCCAAATATCATAAAGGAGAGTCGATAGGGGCTTCGCTGCCGGCCGCGGATCGTAGTCCTTATGAAACACTTTATGGGCAAGACGTGGCACGGCGCATCCATCAGGCACTGGCCTTGCTACCGATGGATCAGCGGGCGGCTATCATCATGCGGGATATGGAAGGATTTTCCTATGAGGAGATCGCTGAGGCCCTGGAAATAAATTTAGGCACGGTTAAGTCCCGCATCGCCCGCGGGCGAGAGGAGCTGCGTCGACACCTGCATGATGTGCTGAGAACGGCATGTCCGCTCTAA
PROTEIN sequence
Length: 216
MYGHEITLAENSGNAKHDDVDISLVARFQAGDTTAFEDIFTLYKDTVFRLAFRLLGDREEALDLSQDVFLTLYKELRRFRRSSRFKTWIYRIVVNRALNRLRLWKRQRRHQTISLDALPKYHKGESIGASLPAADRSPYETLYGQDVARRIHQALALLPMDQRAAIIMRDMEGFSYEEIAEALEINLGTVKSRIARGREELRRHLHDVLRTACPL*